Difference between revisions of "TSS:Hg 101413.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.095 |distance_to_tss=97 |entrez_id=3376 |gc_percent=0.661692 |gene_alias=GRIDHH|IARS1|ILERS|ILRS|IRS|PRO0785 |gene_description=isoleucyl-tRNA synthe...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |IARS1= | ||
| + | |ILERS= | ||
| + | |ILRS= | ||
| + | |IRS= | ||
| + | |PRO0785= | ||
| + | |all_trans=AB209234:0 D28473:-5 ENST00000430417.1:9 uc064uhj.1:9 AK293014:-14 U04953:-16 BX647236:-19 BX647430:-21 AK308202:-21 ENST00000443024.6:-25 uc064ugz.1:-25 BX537417:-25 ENST00000447699.6:-26 uc010mqr.5:-26 BX647071:-26 BX648567:-26 BX537429:-26 BX538109:-26 ENST00000375643.7:-31 uc004art.4:-31 AK301272:-37 ENST00000395554.7:-47 ENST00000490438.1:-47 uc064uhg.1:-47 uc064uhi.1:-47 ENST00000627121.2:-87 NM_013417:-87 NM_002161:-87 NR_073446:-87 uc064ugy.1:-87 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| + | |distance=0 | ||
|distance_to_tss=97 | |distance_to_tss=97 | ||
| + | |end=92293669 | ||
|entrez_id=3376 | |entrez_id=3376 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
|gene_alias=GRIDHH|IARS1|ILERS|ILRS|IRS|PRO0785 | |gene_alias=GRIDHH|IARS1|ILERS|ILRS|IRS|PRO0785 | ||
|gene_description=isoleucyl-tRNA synthetase | |gene_description=isoleucyl-tRNA synthetase | ||
| − | |gene_name=IARS | + | |gene_id=3376 |
| + | |gene_name=isoleucyl-tRNA synthetase | ||
| + | |gene_source=HGNC:5330 | ||
| + | |gene_symbol=IARS | ||
| + | |gene_synonyms=IARS1 ILRS | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:5330 | ||
|nearest_ensembl=ENSG00000196305 | |nearest_ensembl=ENSG00000196305 | ||
|nearest_promoter_id=NM_013417 | |nearest_promoter_id=NM_013417 | ||
|nearest_refseq=NM_002161 | |nearest_refseq=NM_002161 | ||
|nearest_unigene=Hs.445403 | |nearest_unigene=Hs.445403 | ||
| + | |num_trans=30 | ||
| + | |species=human | ||
| + | |start=92293649 | ||
| + | |strand=- | ||
| + | |transcript_name=AB209234 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101413.1 | |tss_id=hg_101413.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q59G75 | ||
}} | }} | ||
Revision as of 18:42, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AB209234 |
|---|---|
| Distance: | 0 |
| Num_trans: | 30 |
| All_trans: | AB209234:0 D28473:-5 ENST00000430417.1:9 uc064uhj.1:9 AK293014:-14 U04953:-16 BX647236:-19 BX647430:-21 AK308202:-21 ENST00000443024.6:-25 uc064ugz.1:-25 BX537417:-25 ENST00000447699.6:-26 uc010mqr.5:-26 BX647071:-26 BX648567:-26 BX537429:-26 BX538109:-26 ENST00000375643.7:-31 uc004art.4:-31 AK301272:-37 ENST00000395554.7:-47 ENST00000490438.1:-47 uc064uhg.1:-47 uc064uhi.1:-47 ENST00000627121.2:-87 NM_013417:-87 NM_002161:-87 NR_073446:-87 uc064ugy.1:-87 |
TATA-Box annotation
| Distance to TSS: | 97 |
|---|---|
| Nearest PromoterID: | NM_013417 |
| Entrez ID: | 3376 |
| Nearest Unigene: | Hs.445403 |
| Nearest Refseq: | NM_002161 |
| Nearest Ensembl: | ENSG00000196305 |
| Gene Name: | isoleucyl-tRNA synthetase |
| Gene Alias: | GRIDHH |
| Gene Description: | isoleucyl-tRNA synthetase |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
