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Difference between revisions of "TSS:Hg 101417.1"

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(Created page with "{{TSSDetail |cpg_percent=0.05 |distance_to_tss=-119 |entrez_id=401541 |gc_percent=0.542289 |gene_alias=CENP-P |gene_description=centromere protein P |gene_name=CENPP |gene_typ...")
 
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{{TSSDetail
 
{{TSSDetail
 +
|all_trans=ENST00000536593.5:0 ENST00000545558.5:0 ENST00000544867.5:0 ENST00000542053.5:0 ENST00000432670.6:0 ENST00000434228.5:0 ENST00000433029.6:0 ENST00000542613.5:0 ENST00000542573.5:0 ENST00000543260.5:0 ENST00000543985.5:0 ENST00000544321.5:0 ENST00000538215.5:0 ENST00000535649.1:0 uc064uhp.1:0 uc064uhq.1:0 uc064uhs.1:0 uc064uhu.1:0 uc064uhw.1:0 uc064uhx.1:0 uc064uhz.1:0 uc064uig.1:0 uc064uih.1:0 uc064uii.1:0 uc064uij.1:0 uc064uik.1:0 uc064uil.1:0 uc064uin.1:0 BC146810:0 CR627363:0 AK307408:0 AK297355:0 BC008491:0 AK001049:0 ENST00000411621.6:-9 uc064uid.1:-9 ENST00000445919.6:11 uc064uic.1:11 ENST00000482475.6:31 uc064uim.1:31 ENST00000442668.6:-180 uc064uhl.1:-180 AB105104:-180 ENST00000545444.5:-214 uc064uhn.1:-214 ENST00000358855.8:-218 ENST00000421075.6:-218 NM_001256394:-218 NR_046106:-218 NM_017948:-218 uc064uhm.1:-218 uc064uib.1:-218 ENST00000536624.5:-260 uc064uif.1:-260
 +
|chr=chr9
 
|cpg_percent=0.05
 
|cpg_percent=0.05
 +
|distance=0
 
|distance_to_tss=-119
 
|distance_to_tss=-119
 +
|end=92325376
 
|entrez_id=401541
 
|entrez_id=401541
 
|gc_percent=0.542289
 
|gc_percent=0.542289
 
|gene_alias=CENP-P
 
|gene_alias=CENP-P
 
|gene_description=centromere protein P
 
|gene_description=centromere protein P
−
|gene_name=CENPP
+
|gene_id=55035
 +
|gene_name=nucleolar protein 8
 +
|gene_source=HGNC:23387
 +
|gene_symbol=NOL8
 +
|gene_synonyms=FLJ20736 Nop132
 
|gene_type=protein-coding
 
|gene_type=protein-coding
 +
|hgnc_mgi_id=HGNC:23387
 
|nearest_ensembl=ENSG00000188312
 
|nearest_ensembl=ENSG00000188312
 
|nearest_promoter_id=NM_001286969
 
|nearest_promoter_id=NM_001286969
 
|nearest_refseq=NM_001012267
 
|nearest_refseq=NM_001012267
 
|nearest_unigene=Hs.713775
 
|nearest_unigene=Hs.713775
 +
|num_trans=54
 +
|species=human
 +
|start=92325322
 +
|strand=-
 +
|transcript_name=ENST00000536593.5 ENST00000545558.5 ENST00000544867.5 ENST00000542053.5 ENST00000432670.6 ENST00000434228.5 ENST00000433029.6 ENST00000542613.5 ENST00000542573.5 ENST00000543260.5 ENST00000543985.5 ENST00000544321.5 ENST00000538215.5 ENST00000535649.1 uc064uhp.1 uc064uhq.1 uc064uhs.1 uc064uhu.1 uc064uhw.1 uc064uhx.1 uc064uhz.1 uc064uig.1 uc064uih.1 uc064uii.1 uc064uij.1 uc064uik.1 uc064uil.1 uc064uin.1 BC146810 CR627363 AK307408 AK297355 BC008491 AK001049
 +
|tss_classification=yes
 
|tss_id=hg_101417.1
 
|tss_id=hg_101417.1
 +
|tss_score=1
 +
|uniprot_id=A6H8Z4 B4DM91 F5GWN9 F5GXV1 F5H101 F5H7D5 F8WE42 Q6AI50 Q76FK4
 
}}
 
}}

Revision as of 18:42, 8 March 2018

Basic information about the TSS

TSS ID:hg_101417.1
Species:human
Chr:chr9
TSS Classification:yes
Start:92325322
End:92325376
Strand:-
TSS Score:1
Start of the center position in the TSS region:
End of the center position in the TSS region:



Gene and protein annotation

Transcript_name:ENST00000536593.5 ENST00000545558.5 ENST00000544867.5 ENST00000542053.5 ENST00000432670.6 ENST00000434228.5 ENST00000433029.6 ENST00000542613.5 ENST00000542573.5 ENST00000543260.5 ENST00000543985.5 ENST00000544321.5 ENST00000538215.5 ENST00000535649.1 uc064uhp.1 uc064uhq.1 uc064uhs.1 uc064uhu.1 uc064uhw.1 uc064uhx.1 uc064uhz.1 uc064uig.1 uc064uih.1 uc064uii.1 uc064uij.1 uc064uik.1 uc064uil.1 uc064uin.1 BC146810 CR627363 AK307408 AK297355 BC008491 AK001049
Distance:0
GeneID:55035
HGNC/MGI_ID:HGNC:23387
UniProt_ID:A6H8Z4 B4DM91 F5GWN9 F5GXV1 F5H101 F5H7D5 F8WE42 Q6AI50 Q76FK4
Gene_name:nucleolar protein 8
Gene_symbol:NOL8
Gene_synonyms:FLJ20736 Nop132
Gene_source:HGNC:23387



Transcript annotation

Transcript_name:ENST00000536593.5 ENST00000545558.5 ENST00000544867.5 ENST00000542053.5 ENST00000432670.6 ENST00000434228.5 ENST00000433029.6 ENST00000542613.5 ENST00000542573.5 ENST00000543260.5 ENST00000543985.5 ENST00000544321.5 ENST00000538215.5 ENST00000535649.1 uc064uhp.1 uc064uhq.1 uc064uhs.1 uc064uhu.1 uc064uhw.1 uc064uhx.1 uc064uhz.1 uc064uig.1 uc064uih.1 uc064uii.1 uc064uij.1 uc064uik.1 uc064uil.1 uc064uin.1 BC146810 CR627363 AK307408 AK297355 BC008491 AK001049
Distance:0
Num_trans:54
All_trans:ENST00000536593.5:0 ENST00000545558.5:0 ENST00000544867.5:0 ENST00000542053.5:0 ENST00000432670.6:0 ENST00000434228.5:0 ENST00000433029.6:0 ENST00000542613.5:0 ENST00000542573.5:0 ENST00000543260.5:0 ENST00000543985.5:0 ENST00000544321.5:0 ENST00000538215.5:0 ENST00000535649.1:0 uc064uhp.1:0 uc064uhq.1:0 uc064uhs.1:0 uc064uhu.1:0 uc064uhw.1:0 uc064uhx.1:0 uc064uhz.1:0 uc064uig.1:0 uc064uih.1:0 uc064uii.1:0 uc064uij.1:0 uc064uik.1:0 uc064uil.1:0 uc064uin.1:0 BC146810:0 CR627363:0 AK307408:0 AK297355:0 BC008491:0 AK001049:0 ENST00000411621.6:-9 uc064uid.1:-9 ENST00000445919.6:11 uc064uic.1:11 ENST00000482475.6:31 uc064uim.1:31 ENST00000442668.6:-180 uc064uhl.1:-180 AB105104:-180 ENST00000545444.5:-214 uc064uhn.1:-214 ENST00000358855.8:-218 ENST00000421075.6:-218 NM_001256394:-218 NR_046106:-218 NM_017948:-218 uc064uhm.1:-218 uc064uib.1:-218 ENST00000536624.5:-260 uc064uif.1:-260



TATA-Box annotation

Distance to TSS:-119
Nearest PromoterID:NM_001286969
Entrez ID:401541
Nearest Unigene:Hs.713775
Nearest Refseq:NM_001012267
Nearest Ensembl:ENSG00000188312
Gene Name:nucleolar protein 8
Gene Alias:CENP-P
Gene Description:centromere protein P
Gene Type:protein-coding
CpG%:0.05
GC%:0.542289
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):
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