Difference between revisions of "TSS:Hg 101420.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=1170 |entrez_id=4969 |gc_percent=0.38806 |gene_alias=OG|OIF|SLRR3A |gene_description=osteoglycin |gene_name=OGN |gene_type=prote...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |OIF= | ||
| + | |SLRR3A= | ||
| + | |all_trans=AK075521:28 BC095443:31 AK129845:31 AL110267:46 BC037273:50 AF202167:63 CR533516:114 DQ891227:114 KJ891722:114 DQ894412:114 AB528473:114 AM392813:114 AM392942:114 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=28 | ||
|distance_to_tss=1170 | |distance_to_tss=1170 | ||
| + | |end=92403538 | ||
|entrez_id=4969 | |entrez_id=4969 | ||
|gc_percent=0.38806 | |gc_percent=0.38806 | ||
|gene_alias=OG|OIF|SLRR3A | |gene_alias=OG|OIF|SLRR3A | ||
|gene_description=osteoglycin | |gene_description=osteoglycin | ||
| − | |gene_name=OGN | + | |gene_id=4969 |
| + | |gene_name=osteoglycin | ||
| + | |gene_source=HGNC:8126 | ||
| + | |gene_symbol=OGN | ||
| + | |gene_synonyms=OIF SLRR3A mimecan | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:8126 | ||
|nearest_ensembl=ENSG00000106809 | |nearest_ensembl=ENSG00000106809 | ||
|nearest_promoter_id=NM_014057 | |nearest_promoter_id=NM_014057 | ||
|nearest_refseq=NM_014057 | |nearest_refseq=NM_014057 | ||
|nearest_unigene=Hs.109439 | |nearest_unigene=Hs.109439 | ||
| + | |num_trans=13 | ||
| + | |species=human | ||
| + | |start=92403520 | ||
| + | |strand=- | ||
| + | |transcript_name=AK075521 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101420.1 | |tss_id=hg_101420.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:42, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK075521 |
|---|---|
| Distance: | 28 |
| Num_trans: | 13 |
| All_trans: | AK075521:28 BC095443:31 AK129845:31 AL110267:46 BC037273:50 AF202167:63 CR533516:114 DQ891227:114 KJ891722:114 DQ894412:114 AB528473:114 AM392813:114 AM392942:114 |
TATA-Box annotation
| Distance to TSS: | 1170 |
|---|---|
| Nearest PromoterID: | NM_014057 |
| Entrez ID: | 4969 |
| Nearest Unigene: | Hs.109439 |
| Nearest Refseq: | NM_014057 |
| Nearest Ensembl: | ENSG00000106809 |
| Gene Name: | osteoglycin |
| Gene Alias: | OG |
| Gene Description: | osteoglycin |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.38806 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
