Difference between revisions of "TSS:Hg 101436.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=21610 |entrez_id=100616351 |gc_percent=0.412935 |gene_alias=- |gene_description=microRNA 4670 |gene_name=MIR4670 |gene_type=ncRNA |...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AK308485:0 | ||
| + | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| + | |distance=0 | ||
|distance_to_tss=21610 | |distance_to_tss=21610 | ||
| + | |end=92506463 | ||
|entrez_id=100616351 | |entrez_id=100616351 | ||
|gc_percent=0.412935 | |gc_percent=0.412935 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=microRNA 4670 | |gene_description=microRNA 4670 | ||
| − | |gene_name= | + | |gene_id=1842 |
| + | |gene_name=extracellular matrix protein 2 | ||
| + | |gene_source=HGNC:3154 | ||
| + | |gene_symbol=ECM2 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:3154 | ||
|nearest_ensembl=ENSG00000264158 | |nearest_ensembl=ENSG00000264158 | ||
|nearest_promoter_id=NR_039817 | |nearest_promoter_id=NR_039817 | ||
|nearest_refseq=NR_039817 | |nearest_refseq=NR_039817 | ||
|nearest_unigene= | |nearest_unigene= | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=92506433 | ||
| + | |strand=- | ||
|tata_box="68(TTGTATAAAGGC,-,0.00)" | |tata_box="68(TTGTATAAAGGC,-,0.00)" | ||
| + | |transcript_name=AK308485 | ||
| + | |tss_classification=no | ||
|tss_id=hg_101436.1 | |tss_id=hg_101436.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:43, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK308485 |
|---|---|
| Distance: | 0 |
| Num_trans: | 1 |
| All_trans: | AK308485:0 |
TATA-Box annotation
| Distance to TSS: | 21610 |
|---|---|
| Nearest PromoterID: | NR_039817 |
| Entrez ID: | 100616351 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_039817 |
| Nearest Ensembl: | ENSG00000264158 |
| Gene Name: | extracellular matrix protein 2 |
| Gene Alias: | - |
| Gene Description: | microRNA 4670 |
| Gene Type: | ncRNA |
| CpG%: | 0 |
| GC%: | 0.412935 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "68(TTGTATAAAGGC,-,0.00)" |
