Difference between revisions of "TSS:Hg 101442.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=-51 |entrez_id=1842 |gc_percent=0.373134 |gene_alias=- |gene_description=extracellular matrix protein 2 |gene_name=ECM2 |gene_type=...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000444490.6:42 NM_001197296:42 NM_001197295:42 NM_001393:42 uc004asf.5:42 ENST00000344604.9:79 ENST00000375540.5:79 uc011lty.3:79 uc004asi.4:79 BX537976:79 AK296458:139 AK312820:144 AK303922:146 AB011792:164 AK298278:-470 | ||
| + | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| + | |distance=42 | ||
|distance_to_tss=-51 | |distance_to_tss=-51 | ||
| + | |end=92536152 | ||
|entrez_id=1842 | |entrez_id=1842 | ||
|gc_percent=0.373134 | |gc_percent=0.373134 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=extracellular matrix protein 2 | |gene_description=extracellular matrix protein 2 | ||
| − | |gene_name=ECM2 | + | |gene_id=1842 |
| + | |gene_name=extracellular matrix protein 2 | ||
| + | |gene_source=HGNC:3154 | ||
| + | |gene_symbol=ECM2 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:3154 | ||
|nearest_ensembl=ENSG00000106823 | |nearest_ensembl=ENSG00000106823 | ||
|nearest_promoter_id=NM_001393 | |nearest_promoter_id=NM_001393 | ||
|nearest_refseq=NM_001393 | |nearest_refseq=NM_001393 | ||
|nearest_unigene=Hs.117060 | |nearest_unigene=Hs.117060 | ||
| + | |num_trans=15 | ||
| + | |species=human | ||
| + | |start=92536133 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000444490.6 NM_001197296 NM_001197295 NM_001393 uc004asf.5 | ||
| + | |tss_classification=no | ||
|tss_id=hg_101442.1 | |tss_id=hg_101442.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=O94769 | ||
}} | }} | ||
Revision as of 18:43, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000444490.6 NM_001197296 NM_001197295 NM_001393 uc004asf.5 |
|---|---|
| Distance: | 42 |
| Num_trans: | 15 |
| All_trans: | ENST00000444490.6:42 NM_001197296:42 NM_001197295:42 NM_001393:42 uc004asf.5:42 ENST00000344604.9:79 ENST00000375540.5:79 uc011lty.3:79 uc004asi.4:79 BX537976:79 AK296458:139 AK312820:144 AK303922:146 AB011792:164 AK298278:-470 |
TATA-Box annotation
| Distance to TSS: | -51 |
|---|---|
| Nearest PromoterID: | NM_001393 |
| Entrez ID: | 1842 |
| Nearest Unigene: | Hs.117060 |
| Nearest Refseq: | NM_001393 |
| Nearest Ensembl: | ENSG00000106823 |
| Gene Name: | extracellular matrix protein 2 |
| Gene Alias: | - |
| Gene Description: | extracellular matrix protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.373134 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
