Difference between revisions of "TSS:Hg 101445.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=-620 |entrez_id=1842 |gc_percent=0.363184 |gene_alias=- |gene_description=extracellular matrix protein 2 |gene_name=ECM2 |gene_...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000395534.2:42 uc011ltz.2:42 AK298278:75 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=42 | ||
|distance_to_tss=-620 | |distance_to_tss=-620 | ||
| + | |end=92536728 | ||
|entrez_id=1842 | |entrez_id=1842 | ||
|gc_percent=0.363184 | |gc_percent=0.363184 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=extracellular matrix protein 2 | |gene_description=extracellular matrix protein 2 | ||
| − | |gene_name=ECM2 | + | |gene_id=1842 |
| + | |gene_name=extracellular matrix protein 2 | ||
| + | |gene_source=HGNC:3154 | ||
| + | |gene_symbol=ECM2 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:3154 | ||
|nearest_ensembl=ENSG00000106823 | |nearest_ensembl=ENSG00000106823 | ||
|nearest_promoter_id=NM_001393 | |nearest_promoter_id=NM_001393 | ||
|nearest_refseq=NM_001393 | |nearest_refseq=NM_001393 | ||
|nearest_unigene=Hs.117060 | |nearest_unigene=Hs.117060 | ||
| + | |num_trans=3 | ||
| + | |species=human | ||
| + | |start=92536696 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000395534.2 uc011ltz.2 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101445.1 | |tss_id=hg_101445.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5T9F4 | ||
}} | }} | ||
Revision as of 18:43, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000395534.2 uc011ltz.2 |
|---|---|
| Distance: | 42 |
| Num_trans: | 3 |
| All_trans: | ENST00000395534.2:42 uc011ltz.2:42 AK298278:75 |
TATA-Box annotation
| Distance to TSS: | -620 |
|---|---|
| Nearest PromoterID: | NM_001393 |
| Entrez ID: | 1842 |
| Nearest Unigene: | Hs.117060 |
| Nearest Refseq: | NM_001393 |
| Nearest Ensembl: | ENSG00000106823 |
| Gene Name: | extracellular matrix protein 2 |
| Gene Alias: | - |
| Gene Description: | extracellular matrix protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.363184 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
