Difference between revisions of "TSS:Hg 101478.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.14 |distance_to_tss=40 |entrez_id=4814 |gc_percent=0.800995 |gene_alias=NIN1|NINJURIN |gene_description=ninjurin 1 |gene_name=NINJ1 |gene_type=prote...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NINJURIN= | ||
| + | |all_trans=ENST00000470314.5:0 uc064ujm.1:0 BC004440:0 BC000298:0 U72661:0 U91512:0 BC019336:0 ENST00000461162.5:16 ENST00000490564.1:16 uc064ujn.1:16 uc064ujo.1:16 BT007164:18 KJ891705:18 KJ897247:18 KR711305:18 CU690562:18 ENST00000375446.4:-27 NM_004148:-27 uc004atg.4:-27 BC048212:-27 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| + | |distance=0 | ||
|distance_to_tss=40 | |distance_to_tss=40 | ||
| + | |end=93134261 | ||
|entrez_id=4814 | |entrez_id=4814 | ||
|gc_percent=0.800995 | |gc_percent=0.800995 | ||
|gene_alias=NIN1|NINJURIN | |gene_alias=NIN1|NINJURIN | ||
|gene_description=ninjurin 1 | |gene_description=ninjurin 1 | ||
| − | |gene_name=NINJ1 | + | |gene_id=4814 |
| + | |gene_name=ninjurin 1 | ||
| + | |gene_source=HGNC:7824 | ||
| + | |gene_symbol=NINJ1 | ||
| + | |gene_synonyms=NIN1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:7824 | ||
|nearest_ensembl=ENSG00000131669 | |nearest_ensembl=ENSG00000131669 | ||
|nearest_promoter_id=NM_004148 | |nearest_promoter_id=NM_004148 | ||
|nearest_refseq=NM_004148 | |nearest_refseq=NM_004148 | ||
|nearest_unigene=Hs.494457 | |nearest_unigene=Hs.494457 | ||
| + | |num_trans=20 | ||
| + | |species=human | ||
| + | |start=93134234 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000470314.5 uc064ujm.1 BC004440 BC000298 U72661 U91512 BC019336 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101478.1 | |tss_id=hg_101478.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:45, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000470314.5 uc064ujm.1 BC004440 BC000298 U72661 U91512 BC019336 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | ENST00000470314.5:0 uc064ujm.1:0 BC004440:0 BC000298:0 U72661:0 U91512:0 BC019336:0 ENST00000461162.5:16 ENST00000490564.1:16 uc064ujn.1:16 uc064ujo.1:16 BT007164:18 KJ891705:18 KJ897247:18 KR711305:18 CU690562:18 ENST00000375446.4:-27 NM_004148:-27 uc004atg.4:-27 BC048212:-27 |
TATA-Box annotation
| Distance to TSS: | 40 |
|---|---|
| Nearest PromoterID: | NM_004148 |
| Entrez ID: | 4814 |
| Nearest Unigene: | Hs.494457 |
| Nearest Refseq: | NM_004148 |
| Nearest Ensembl: | ENSG00000131669 |
| Gene Name: | ninjurin 1 |
| Gene Alias: | NIN1 |
| Gene Description: | ninjurin 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
