Difference between revisions of "TSS:Hg 101492.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.095 |distance_to_tss=-22 |entrez_id=445577 |gc_percent=0.721393 |gene_alias=bA165J3.3 |gene_description=chromosome 9 open reading frame 129 |gene_na...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000375419.1:10 NM_001098808:10 uc010mre.3:10 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| + | |distance=10 | ||
|distance_to_tss=-22 | |distance_to_tss=-22 | ||
| + | |end=93346448 | ||
|entrez_id=445577 | |entrez_id=445577 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
|gene_alias=bA165J3.3 | |gene_alias=bA165J3.3 | ||
|gene_description=chromosome 9 open reading frame 129 | |gene_description=chromosome 9 open reading frame 129 | ||
| − | |gene_name=C9orf129 | + | |gene_id=445577 |
| + | |gene_name=chromosome 9 open reading frame 129 | ||
| + | |gene_source=HGNC:31116 | ||
| + | |gene_symbol=C9orf129 | ||
| + | |gene_synonyms=bA165J3.3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:31116 | ||
|nearest_ensembl=ENSG00000204352 | |nearest_ensembl=ENSG00000204352 | ||
|nearest_promoter_id=NM_001098808 | |nearest_promoter_id=NM_001098808 | ||
|nearest_refseq=NM_001098808 | |nearest_refseq=NM_001098808 | ||
|nearest_unigene=Hs.575636 | |nearest_unigene=Hs.575636 | ||
| + | |num_trans=3 | ||
| + | |species=human | ||
| + | |start=93346423 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000375419.1 NM_001098808 uc010mre.3 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101492.1 | |tss_id=hg_101492.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5T035 | ||
}} | }} | ||
Revision as of 18:45, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000375419.1 NM_001098808 uc010mre.3 |
|---|---|
| Distance: | 10 |
| Num_trans: | 3 |
| All_trans: | ENST00000375419.1:10 NM_001098808:10 uc010mre.3:10 |
TATA-Box annotation
| Distance to TSS: | -22 |
|---|---|
| Nearest PromoterID: | NM_001098808 |
| Entrez ID: | 445577 |
| Nearest Unigene: | Hs.575636 |
| Nearest Refseq: | NM_001098808 |
| Nearest Ensembl: | ENSG00000204352 |
| Gene Name: | chromosome 9 open reading frame 129 |
| Gene Alias: | bA165J3.3 |
| Gene Description: | chromosome 9 open reading frame 129 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
