Difference between revisions of "TSS:Hg 10150.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.145 |distance_to_tss=-49 |entrez_id=473 |gc_percent=0.761194 |gene_alias=ARG|ARP|ATN1L|DNB1|NEDBEH |gene_description=arginine-glutamic acid dipeptid...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |ARP= | ||
| + | |ATN1L= | ||
| + | |DNB1= | ||
| + | |NEDBEH= | ||
| + | |all_trans=ENST00000400908.6:34 uc001apf.4:34 BC009619:34 NM_012102:37 NM_001042681:37 ENST00000337907.7:212 uc001ape.4:212 AB036737:212 BC062342:356 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| + | |distance=34 | ||
|distance_to_tss=-49 | |distance_to_tss=-49 | ||
| + | |end=8817701 | ||
|entrez_id=473 | |entrez_id=473 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
|gene_alias=ARG|ARP|ATN1L|DNB1|NEDBEH | |gene_alias=ARG|ARP|ATN1L|DNB1|NEDBEH | ||
|gene_description=arginine-glutamic acid dipeptide repeats | |gene_description=arginine-glutamic acid dipeptide repeats | ||
| − | |gene_name=RERE | + | |gene_id=473 |
| + | |gene_name=arginine-glutamic acid dipeptide (RE) repeats | ||
| + | |gene_source=HGNC:9965 | ||
| + | |gene_symbol=RERE | ||
| + | |gene_synonyms=ARG ARP DNB1 KIAA0458 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:9965 | ||
|nearest_ensembl=ENSG00000142599 | |nearest_ensembl=ENSG00000142599 | ||
|nearest_promoter_id=NM_001042681 | |nearest_promoter_id=NM_001042681 | ||
|nearest_refseq=NM_012102 | |nearest_refseq=NM_012102 | ||
|nearest_unigene=Hs.463041 | |nearest_unigene=Hs.463041 | ||
| + | |num_trans=9 | ||
| + | |species=human | ||
| + | |start=8817676 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000400908.6 uc001apf.4 BC009619 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10150.1 | |tss_id=hg_10150.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A024R4E9 Q9P2R6 | ||
}} | }} | ||
Revision as of 18:46, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000400908.6 uc001apf.4 BC009619 |
|---|---|
| Distance: | 34 |
| Num_trans: | 9 |
| All_trans: | ENST00000400908.6:34 uc001apf.4:34 BC009619:34 NM_012102:37 NM_001042681:37 ENST00000337907.7:212 uc001ape.4:212 AB036737:212 BC062342:356 |
TATA-Box annotation
| Distance to TSS: | -49 |
|---|---|
| Nearest PromoterID: | NM_001042681 |
| Entrez ID: | 473 |
| Nearest Unigene: | Hs.463041 |
| Nearest Refseq: | NM_012102 |
| Nearest Ensembl: | ENSG00000142599 |
| Gene Name: | arginine-glutamic acid dipeptide (RE) repeats |
| Gene Alias: | ARG |
| Gene Description: | arginine-glutamic acid dipeptide repeats |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
