Difference between revisions of "TSS:Hg 101508.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.145 |distance_to_tss=-76 |entrez_id=56033 |gc_percent=0.81592 |gene_alias=- |gene_description=BARX homeobox 1 |gene_name=BARX1 |gene_type=protein-co...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000253968.10:25 uc010mrh.4:25 BC064363:26 NM_021570:71 AF213356:77 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| + | |distance=25 | ||
|distance_to_tss=-76 | |distance_to_tss=-76 | ||
| + | |end=93955407 | ||
|entrez_id=56033 | |entrez_id=56033 | ||
|gc_percent=0.81592 | |gc_percent=0.81592 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=BARX homeobox 1 | |gene_description=BARX homeobox 1 | ||
| − | |gene_name=BARX1 | + | |gene_id=56033 |
| + | |gene_name=BARX homeobox 1 | ||
| + | |gene_source=HGNC:955 | ||
| + | |gene_symbol=BARX1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:955 | ||
|nearest_ensembl=ENSG00000131668 | |nearest_ensembl=ENSG00000131668 | ||
|nearest_promoter_id=NM_021570 | |nearest_promoter_id=NM_021570 | ||
|nearest_refseq=NM_021570 | |nearest_refseq=NM_021570 | ||
|nearest_unigene=Hs.164960 | |nearest_unigene=Hs.164960 | ||
| + | |num_trans=5 | ||
| + | |species=human | ||
| + | |start=93955396 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000253968.10 uc010mrh.4 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101508.1 | |tss_id=hg_101508.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q9HBU1 | ||
}} | }} | ||
Revision as of 18:46, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000253968.10 uc010mrh.4 |
|---|---|
| Distance: | 25 |
| Num_trans: | 5 |
| All_trans: | ENST00000253968.10:25 uc010mrh.4:25 BC064363:26 NM_021570:71 AF213356:77 |
TATA-Box annotation
| Distance to TSS: | -76 |
|---|---|
| Nearest PromoterID: | NM_021570 |
| Entrez ID: | 56033 |
| Nearest Unigene: | Hs.164960 |
| Nearest Refseq: | NM_021570 |
| Nearest Ensembl: | ENSG00000131668 |
| Gene Name: | BARX homeobox 1 |
| Gene Alias: | - |
| Gene Description: | BARX homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
