Personal tools

Difference between revisions of "TSS:Hg 101511.1"

From referenceTSS

Jump to: navigation, search
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-15285 |entrez_id=101928099 |gc_percent=0.348259 |gene_alias=PCAN-R2 |gene_description=prostate cancer associated transcript 7 (...")
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 +
|chr=chr9
 
|cpg_percent=0.01
 
|cpg_percent=0.01
 +
|distance=
 
|distance_to_tss=-15285
 
|distance_to_tss=-15285
 +
|end=94539761
 
|entrez_id=101928099
 
|entrez_id=101928099
 
|gc_percent=0.348259
 
|gc_percent=0.348259
Line 12: Line 15:
 
|nearest_refseq=NR_121566
 
|nearest_refseq=NR_121566
 
|nearest_unigene=Hs.674409
 
|nearest_unigene=Hs.674409
 +
|num_trans=0
 +
|species=human
 +
|start=94539758
 +
|strand=-
 
|tata_box="62(GTCTCTAAATAG,-,0.00),64(CTCTAAATAGCC,+,0.00)"
 
|tata_box="62(GTCTCTAAATAG,-,0.00),64(CTCTAAATAGCC,+,0.00)"
 +
|transcript_name=
 +
|tss_classification=no
 
|tss_id=hg_101511.1
 
|tss_id=hg_101511.1
 +
|tss_score=1
 
}}
 
}}

Revision as of 18:46, 8 March 2018

Basic information about the TSS


TSS ID:hg_101511.1
Species:human
Chr:chr9
TSS Classification:no
Start:94539758
End:94539761
Strand:-
TSS Score:1
Start of the center position in the TSS region:
End of the center position in the TSS region:



Gene and protein annotation


Transcript_name:
Distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Gene_name:PCAT7
Gene_symbol:
Gene_synonyms:
Gene_source:



Transcript annotation


Transcript_name:
Distance:
Num_trans:0
All_trans:



TATA-Box annotation


Distance to TSS:-15285
Nearest PromoterID:NR_121569
Entrez ID:101928099
Nearest Unigene:Hs.674409
Nearest Refseq:NR_121566
Nearest Ensembl:ENSG00000231806
Gene Name:PCAT7
Gene Alias:PCAN-R2
Gene Description:prostate cancer associated transcript 7 (non-protein coding)
Gene Type:ncRNA
CpG%:0.01
GC%:0.348259
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):"62(GTCTCTAAATAG,-,0.00),64(CTCTAAATAGCC,+,0.00)"