Difference between revisions of "TSS:Hg 101550.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.055 |distance_to_tss=363 |entrez_id=2176 |gc_percent=0.552239 |gene_alias=FA3|FAC|FACC |gene_description=Fanconi anemia complementation group C |gen...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |FAC= | ||
| + | |FACC= | ||
| + | |all_trans=ENST00000433829.1:0 uc064umi.1:0 AK310599:-23 ENST00000375305.5:-315 uc022bkl.2:-315 X66894:-315 NM_001243743:-344 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| + | |distance=0 | ||
|distance_to_tss=363 | |distance_to_tss=363 | ||
| + | |end=95316910 | ||
|entrez_id=2176 | |entrez_id=2176 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
|gene_alias=FA3|FAC|FACC | |gene_alias=FA3|FAC|FACC | ||
|gene_description=Fanconi anemia complementation group C | |gene_description=Fanconi anemia complementation group C | ||
| − | |gene_name=FANCC | + | |gene_id=2176 |
| + | |gene_name=Fanconi anemia complementation group C | ||
| + | |gene_source=HGNC:3584 | ||
| + | |gene_symbol=FANCC | ||
| + | |gene_synonyms=FA3 FAC | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:3584 | ||
|nearest_ensembl=ENSG00000158169 | |nearest_ensembl=ENSG00000158169 | ||
|nearest_promoter_id=NM_001243743 | |nearest_promoter_id=NM_001243743 | ||
|nearest_refseq=NM_000136 | |nearest_refseq=NM_000136 | ||
|nearest_unigene=Hs.494529 | |nearest_unigene=Hs.494529 | ||
| + | |num_trans=7 | ||
| + | |species=human | ||
| + | |start=95316872 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000433829.1 uc064umi.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101550.1 | |tss_id=hg_101550.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B1ALR7 | ||
}} | }} | ||
Revision as of 18:48, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000433829.1 uc064umi.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | ENST00000433829.1:0 uc064umi.1:0 AK310599:-23 ENST00000375305.5:-315 uc022bkl.2:-315 X66894:-315 NM_001243743:-344 |
TATA-Box annotation
| Distance to TSS: | 363 |
|---|---|
| Nearest PromoterID: | NM_001243743 |
| Entrez ID: | 2176 |
| Nearest Unigene: | Hs.494529 |
| Nearest Refseq: | NM_000136 |
| Nearest Ensembl: | ENSG00000158169 |
| Gene Name: | Fanconi anemia complementation group C |
| Gene Alias: | FA3 |
| Gene Description: | Fanconi anemia complementation group C |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
