Difference between revisions of "TSS:Hg 101594.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=-24 |entrez_id=3293 |gc_percent=0.517413 |gene_alias=EDH17B3|SDR12C2 |gene_description=hydroxysteroid 17-beta dehydrogenase 3 |g...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |SDR12C2= | ||
| + | |all_trans=ENST00000375263.7:19 ENST00000375262.3:19 NM_000197:19 uc004awa.2:19 uc010msc.1:19 U05659:19 BC034281:35 KJ891397:65 KR710806:65 KR710807:65 KR710808:65 KR710809:65 DQ891812:65 DQ894995:65 CU689848:65 BT019371:67 CR541894:67 KU178130:67 KU178131:67 KU178132:67 KU178133:67 KU178134:67 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=19 | ||
|distance_to_tss=-24 | |distance_to_tss=-24 | ||
| + | |end=96302181 | ||
|entrez_id=3293 | |entrez_id=3293 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
|gene_alias=EDH17B3|SDR12C2 | |gene_alias=EDH17B3|SDR12C2 | ||
|gene_description=hydroxysteroid 17-beta dehydrogenase 3 | |gene_description=hydroxysteroid 17-beta dehydrogenase 3 | ||
| − | |gene_name=HSD17B3 | + | |gene_id=3293 |
| + | |gene_name=hydroxysteroid (17-beta) dehydrogenase 3 | ||
| + | |gene_source=HGNC:5212 | ||
| + | |gene_symbol=HSD17B3 | ||
| + | |gene_synonyms=SDR12C2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:5212 | ||
|nearest_ensembl=ENSG00000130948 | |nearest_ensembl=ENSG00000130948 | ||
|nearest_promoter_id=NM_000197 | |nearest_promoter_id=NM_000197 | ||
|nearest_refseq=NM_000197 | |nearest_refseq=NM_000197 | ||
|nearest_unigene=Hs.477 | |nearest_unigene=Hs.477 | ||
| + | |num_trans=22 | ||
| + | |species=human | ||
| + | |start=96302170 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000375263.7 ENST00000375262.3 NM_000197 uc004awa.2 uc010msc.1 U05659 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101594.1 | |tss_id=hg_101594.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=P37058 Q6FH62 | ||
}} | }} | ||
Revision as of 18:50, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000375263.7 ENST00000375262.3 NM_000197 uc004awa.2 uc010msc.1 U05659 |
|---|---|
| Distance: | 19 |
| Num_trans: | 22 |
| All_trans: | ENST00000375263.7:19 ENST00000375262.3:19 NM_000197:19 uc004awa.2:19 uc010msc.1:19 U05659:19 BC034281:35 KJ891397:65 KR710806:65 KR710807:65 KR710808:65 KR710809:65 DQ891812:65 DQ894995:65 CU689848:65 BT019371:67 CR541894:67 KU178130:67 KU178131:67 KU178132:67 KU178133:67 KU178134:67 |
TATA-Box annotation
| Distance to TSS: | -24 |
|---|---|
| Nearest PromoterID: | NM_000197 |
| Entrez ID: | 3293 |
| Nearest Unigene: | Hs.477 |
| Nearest Refseq: | NM_000197 |
| Nearest Ensembl: | ENSG00000130948 |
| Gene Name: | hydroxysteroid (17-beta) dehydrogenase 3 |
| Gene Alias: | EDH17B3 |
| Gene Description: | hydroxysteroid 17-beta dehydrogenase 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
