Difference between revisions of "TSS:Hg 101606.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.155 |distance_to_tss=13 |entrez_id=195827 |gc_percent=0.810945 |gene_alias=C9orf21 |gene_description=AhpC/TSA antioxidant enzyme domain containing 1...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000375234.7:0 ENST00000446045.1:0 NM_153698:0 uc004awm.4:0 uc064uox.1:0 BC136501:0 BC136503:0 ENST00000464512.1:309 uc064uoy.1:309 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| + | |distance=0 | ||
|distance_to_tss=13 | |distance_to_tss=13 | ||
| + | |end=96655327 | ||
|entrez_id=195827 | |entrez_id=195827 | ||
|gc_percent=0.810945 | |gc_percent=0.810945 | ||
|gene_alias=C9orf21 | |gene_alias=C9orf21 | ||
|gene_description=AhpC/TSA antioxidant enzyme domain containing 1 | |gene_description=AhpC/TSA antioxidant enzyme domain containing 1 | ||
| − | |gene_name=AAED1 | + | |gene_id=195827 |
| + | |gene_name=AhpC/TSA antioxidant enzyme domain containing 1 | ||
| + | |gene_source=HGNC:16881 | ||
| + | |gene_symbol=AAED1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:16881 | ||
|nearest_ensembl=ENSG00000158122 | |nearest_ensembl=ENSG00000158122 | ||
|nearest_promoter_id=NM_153698 | |nearest_promoter_id=NM_153698 | ||
|nearest_refseq=NM_153698 | |nearest_refseq=NM_153698 | ||
|nearest_unigene=Hs.44640 | |nearest_unigene=Hs.44640 | ||
| + | |num_trans=9 | ||
| + | |species=human | ||
| + | |start=96655280 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000375234.7 ENST00000446045.1 NM_153698 uc004awm.4 uc064uox.1 BC136501 BC136503 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101606.1 | |tss_id=hg_101606.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B7ZKK1 H0Y5J5 Q7RTV5 | ||
}} | }} | ||
Revision as of 18:50, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000375234.7 ENST00000446045.1 NM_153698 uc004awm.4 uc064uox.1 BC136501 BC136503 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENST00000375234.7:0 ENST00000446045.1:0 NM_153698:0 uc004awm.4:0 uc064uox.1:0 BC136501:0 BC136503:0 ENST00000464512.1:309 uc064uoy.1:309 |
TATA-Box annotation
| Distance to TSS: | 13 |
|---|---|
| Nearest PromoterID: | NM_153698 |
| Entrez ID: | 195827 |
| Nearest Unigene: | Hs.44640 |
| Nearest Refseq: | NM_153698 |
| Nearest Ensembl: | ENSG00000158122 |
| Gene Name: | AhpC/TSA antioxidant enzyme domain containing 1 |
| Gene Alias: | C9orf21 |
| Gene Description: | AhpC/TSA antioxidant enzyme domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.810945 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
