Difference between revisions of "TSS:Hg 101669.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.115 |distance_to_tss=136 |entrez_id=9830 |gc_percent=0.751244 |gene_alias=- |gene_description=tripartite motif containing 14 |gene_name=TRIM14 |gene...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000375098.7:0 ENST00000341469.6:0 ENST00000342043.3:0 ENST00000475147.1:0 uc064urn.1:0 uc004ayh.3:0 uc004ayg.3:0 uc064urs.1:0 BC006333:0 AF220130:0 AF220131:0 D50919:0 AK292825:0 DQ893293:0 DQ896623:0 AB529155:0 AK055833:-44 ENST00000478401.1:49 uc064urt.1:49 NM_033219:-104 NM_014788:-104 AK097480:260 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| + | |distance=0 | ||
|distance_to_tss=136 | |distance_to_tss=136 | ||
| + | |end=98119249 | ||
|entrez_id=9830 | |entrez_id=9830 | ||
|gc_percent=0.751244 | |gc_percent=0.751244 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=tripartite motif containing 14 | |gene_description=tripartite motif containing 14 | ||
| − | |gene_name=TRIM14 | + | |gene_id=9830 |
| + | |gene_name=tripartite motif containing 14 | ||
| + | |gene_source=HGNC:16283 | ||
| + | |gene_symbol=TRIM14 | ||
| + | |gene_synonyms=KIAA0129 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:16283 | ||
|nearest_ensembl=ENSG00000106785 | |nearest_ensembl=ENSG00000106785 | ||
|nearest_promoter_id=NM_033219 | |nearest_promoter_id=NM_033219 | ||
|nearest_refseq=NM_014788 | |nearest_refseq=NM_014788 | ||
|nearest_unigene=Hs.575631 | |nearest_unigene=Hs.575631 | ||
| + | |num_trans=22 | ||
| + | |species=human | ||
| + | |start=98119184 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000375098.7 ENST00000341469.6 ENST00000342043.3 ENST00000475147.1 uc064urn.1 uc004ayh.3 uc004ayg.3 uc064urs.1 BC006333 AF220130 AF220131 D50919 AK292825 DQ893293 DQ896623 AB529155 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101669.1 | |tss_id=hg_101669.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A024R165 F2Z2M2 Q14142 | ||
}} | }} | ||
Revision as of 18:53, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000375098.7 ENST00000341469.6 ENST00000342043.3 ENST00000475147.1 uc064urn.1 uc004ayh.3 uc004ayg.3 uc064urs.1 BC006333 AF220130 AF220131 D50919 AK292825 DQ893293 DQ896623 AB529155 |
|---|---|
| Distance: | 0 |
| Num_trans: | 22 |
| All_trans: | ENST00000375098.7:0 ENST00000341469.6:0 ENST00000342043.3:0 ENST00000475147.1:0 uc064urn.1:0 uc004ayh.3:0 uc004ayg.3:0 uc064urs.1:0 BC006333:0 AF220130:0 AF220131:0 D50919:0 AK292825:0 DQ893293:0 DQ896623:0 AB529155:0 AK055833:-44 ENST00000478401.1:49 uc064urt.1:49 NM_033219:-104 NM_014788:-104 AK097480:260 |
TATA-Box annotation
| Distance to TSS: | 136 |
|---|---|
| Nearest PromoterID: | NM_033219 |
| Entrez ID: | 9830 |
| Nearest Unigene: | Hs.575631 |
| Nearest Refseq: | NM_014788 |
| Nearest Ensembl: | ENSG00000106785 |
| Gene Name: | tripartite motif containing 14 |
| Gene Alias: | - |
| Gene Description: | tripartite motif containing 14 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
