Difference between revisions of "TSS:Hg 101732.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.11 |distance_to_tss=0 |entrez_id=54881 |gc_percent=0.716418 |gene_alias=Ipi1|bA208F1.2 |gene_description=testis expressed 10 |gene_name=TEX10 |gene_...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=NM_017746:0 ENST00000374902.8:33 uc004bas.4:33 AK298916:76 AB060968:79 AK303662:79 AK000294:80 AK304869:89 BC030652:159 ENST00000535814.5:401 NM_001161584:401 uc011lvg.3:401 AK302619:401 | ||
| + | |bA208F1.2= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| + | |distance=0 | ||
|distance_to_tss=0 | |distance_to_tss=0 | ||
| + | |end=100352982 | ||
|entrez_id=54881 | |entrez_id=54881 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
|gene_alias=Ipi1|bA208F1.2 | |gene_alias=Ipi1|bA208F1.2 | ||
|gene_description=testis expressed 10 | |gene_description=testis expressed 10 | ||
| − | |gene_name=TEX10 | + | |gene_id=54881 |
| + | |gene_name=testis expressed 10 | ||
| + | |gene_source=HGNC:25988 | ||
| + | |gene_symbol=TEX10 | ||
| + | |gene_synonyms=FLJ20287 Ipi1 bA208F1.2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:25988 | ||
|nearest_ensembl=ENSG00000136891 | |nearest_ensembl=ENSG00000136891 | ||
|nearest_promoter_id=NM_017746 | |nearest_promoter_id=NM_017746 | ||
|nearest_refseq=NM_017746 | |nearest_refseq=NM_017746 | ||
|nearest_unigene=Hs.494648 | |nearest_unigene=Hs.494648 | ||
| + | |num_trans=13 | ||
| + | |species=human | ||
| + | |start=100352971 | ||
| + | |strand=- | ||
| + | |transcript_name=NM_017746 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101732.1 | |tss_id=hg_101732.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q9NXF1 | ||
}} | }} | ||
Revision as of 18:56, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_017746 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | NM_017746:0 ENST00000374902.8:33 uc004bas.4:33 AK298916:76 AB060968:79 AK303662:79 AK000294:80 AK304869:89 BC030652:159 ENST00000535814.5:401 NM_001161584:401 uc011lvg.3:401 AK302619:401 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_017746 |
| Entrez ID: | 54881 |
| Nearest Unigene: | Hs.494648 |
| Nearest Refseq: | NM_017746 |
| Nearest Ensembl: | ENSG00000136891 |
| Gene Name: | testis expressed 10 |
| Gene Alias: | Ipi1 |
| Gene Description: | testis expressed 10 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
