Difference between revisions of "TSS:Hg 101869.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.095 |distance_to_tss=231 |entrez_id=8518 |gc_percent=0.671642 |gene_alias=DYS|ELP1|FD|IKAP|IKI3|TOT1 |gene_description="inhibitor of kappa light pol...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ELP1= | ||
| + | |FD= | ||
| + | |IKAP= | ||
| + | |IKI3= | ||
| + | |TOT1= | ||
| + | |all_trans=ENST00000374647.9:0 uc004bdm.5:0 AF153419:0 AB210033:0 AK001641:0 AK225798:0 AF044195:0 AK289962:0 AK304742:87 ENST00000537196.1:108 uc010mtq.4:108 CR749385:108 BC033094:167 NM_003640:-191 NM_001318360:-191 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| + | |distance=0 | ||
|distance_to_tss=231 | |distance_to_tss=231 | ||
| + | |end=108934141 | ||
|entrez_id=8518 | |entrez_id=8518 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
|gene_alias=DYS|ELP1|FD|IKAP|IKI3|TOT1 | |gene_alias=DYS|ELP1|FD|IKAP|IKI3|TOT1 | ||
|gene_description="inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein" | |gene_description="inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein" | ||
| − | |gene_name=IKBKAP | + | |gene_id=8518 |
| + | |gene_name="inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein" | ||
| + | |gene_source=HGNC:5959 | ||
| + | |gene_symbol=IKBKAP | ||
| + | |gene_synonyms=ELP1 IKAP IKI3 TOT1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:5959 | ||
|nearest_ensembl=ENSG00000070061 | |nearest_ensembl=ENSG00000070061 | ||
|nearest_promoter_id=NM_003640 | |nearest_promoter_id=NM_003640 | ||
|nearest_refseq=NM_003640 | |nearest_refseq=NM_003640 | ||
|nearest_unigene=Hs.494738 | |nearest_unigene=Hs.494738 | ||
| + | |num_trans=15 | ||
| + | |species=human | ||
| + | |start=108934060 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000374647.9 uc004bdm.5 AF153419 AB210033 AK001641 AK225798 AF044195 AK289962 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101869.1 | |tss_id=hg_101869.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=O95163 Q4LE38 | ||
}} | }} | ||
Revision as of 19:02, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000374647.9 uc004bdm.5 AF153419 AB210033 AK001641 AK225798 AF044195 AK289962 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | ENST00000374647.9:0 uc004bdm.5:0 AF153419:0 AB210033:0 AK001641:0 AK225798:0 AF044195:0 AK289962:0 AK304742:87 ENST00000537196.1:108 uc010mtq.4:108 CR749385:108 BC033094:167 NM_003640:-191 NM_001318360:-191 |
TATA-Box annotation
| Distance to TSS: | 231 |
|---|---|
| Nearest PromoterID: | NM_003640 |
| Entrez ID: | 8518 |
| Nearest Unigene: | Hs.494738 |
| Nearest Refseq: | NM_003640 |
| Nearest Ensembl: | ENSG00000070061 |
| Gene Name: | "inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein" |
| Gene Alias: | DYS |
| Gene Description: | "inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein" |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
