Difference between revisions of "TSS:Hg 101879.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.13 |distance_to_tss=0 |entrez_id=23731 |gc_percent=0.721393 |gene_alias=C9orf5|CG-2|CG2 |gene_description=transmembrane protein 245 |gene_name=TMEM2...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CG-2= | ||
| + | |CG2= | ||
| + | |all_trans=ENST00000374586.7:0 NM_032012:0 uc004bdt.5:0 AF153415:0 AK299952:0 BC142984:0 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| + | |distance=0 | ||
|distance_to_tss=0 | |distance_to_tss=0 | ||
| + | |end=109119975 | ||
|entrez_id=23731 | |entrez_id=23731 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
|gene_alias=C9orf5|CG-2|CG2 | |gene_alias=C9orf5|CG-2|CG2 | ||
|gene_description=transmembrane protein 245 | |gene_description=transmembrane protein 245 | ||
| − | |gene_name=TMEM245 | + | |gene_id=23731 |
| + | |gene_name=transmembrane protein 245 | ||
| + | |gene_source=HGNC:1363 | ||
| + | |gene_symbol=TMEM245 | ||
| + | |gene_synonyms=CG-2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:1363 | ||
|nearest_ensembl=ENSG00000106771 | |nearest_ensembl=ENSG00000106771 | ||
|nearest_promoter_id=NM_032012 | |nearest_promoter_id=NM_032012 | ||
|nearest_refseq=NM_032012 | |nearest_refseq=NM_032012 | ||
|nearest_unigene=Hs.308074 | |nearest_unigene=Hs.308074 | ||
| + | |num_trans=6 | ||
| + | |species=human | ||
| + | |start=109119915 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000374586.7 NM_032012 uc004bdt.5 AF153415 AK299952 BC142984 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101879.1 | |tss_id=hg_101879.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q9H330 | ||
}} | }} | ||
Revision as of 19:02, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000374586.7 NM_032012 uc004bdt.5 AF153415 AK299952 BC142984 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENST00000374586.7:0 NM_032012:0 uc004bdt.5:0 AF153415:0 AK299952:0 BC142984:0 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_032012 |
| Entrez ID: | 23731 |
| Nearest Unigene: | Hs.308074 |
| Nearest Refseq: | NM_032012 |
| Nearest Ensembl: | ENSG00000106771 |
| Gene Name: | transmembrane protein 245 |
| Gene Alias: | C9orf5 |
| Gene Description: | transmembrane protein 245 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
