Difference between revisions of "TSS:Hg 102065.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.075 |distance_to_tss=147 |entrez_id=9991 |gc_percent=0.597015 |gene_alias=ROD1 |gene_description=polypyrimidine tract binding protein 3 |gene_name=P...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=KJ902048:20 CU692212:20 ENST00000458258.5:-131 NM_001244898:-131 uc004bfv.4:-131 BC044585:-131 ENST00000210227.4:-134 uc064vce.1:-134 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| + | |distance=20 | ||
|distance_to_tss=147 | |distance_to_tss=147 | ||
| + | |end=112332895 | ||
|entrez_id=9991 | |entrez_id=9991 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_005156 | |nearest_refseq=NM_005156 | ||
|nearest_unigene=Hs.269988 | |nearest_unigene=Hs.269988 | ||
| + | |num_trans=8 | ||
| + | |species=human | ||
| + | |start=112332863 | ||
| + | |strand=- | ||
| + | |transcript_name=KJ902048 CU692212 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102065.1 | |tss_id=hg_102065.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 19:10, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | KJ902048 CU692212 |
|---|---|
| Distance: | 20 |
| Num_trans: | 8 |
| All_trans: | KJ902048:20 CU692212:20 ENST00000458258.5:-131 NM_001244898:-131 uc004bfv.4:-131 BC044585:-131 ENST00000210227.4:-134 uc064vce.1:-134 |
TATA-Box annotation
| Distance to TSS: | 147 |
|---|---|
| Nearest PromoterID: | NM_001244898 |
| Entrez ID: | 9991 |
| Nearest Unigene: | Hs.269988 |
| Nearest Refseq: | NM_005156 |
| Nearest Ensembl: | ENSG00000119314 |
| Gene Name: | PTBP3 |
| Gene Alias: | ROD1 |
| Gene Description: | polypyrimidine tract binding protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
