Difference between revisions of "TSS:Hg 10207.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.14 |distance_to_tss=-23 |entrez_id=80045 |gc_percent=0.80597 |gene_alias=- |gene_description=G protein-coupled receptor 157 |gene_name=GPR157 |gene_...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=BC094733:0 ENST00000377411.4:17 NM_024980:17 uc001apq.2:17 AY768808:17 AK292888:63 AK304154:63 AK022194:85 BC018691:-97 BC156509:158 BC172507:158 DQ892804:158 DQ896051:158 KJ903272:159 ENST00000466131.1:406 uc057can.1:406 DQ576660:436 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| + | |distance=0 | ||
|distance_to_tss=-23 | |distance_to_tss=-23 | ||
| + | |end=9129200 | ||
|entrez_id=80045 | |entrez_id=80045 | ||
|gc_percent=0.80597 | |gc_percent=0.80597 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=G protein-coupled receptor 157 | |gene_description=G protein-coupled receptor 157 | ||
| − | |gene_name=GPR157 | + | |gene_id=80045 |
| + | |gene_name=G protein-coupled receptor 157 | ||
| + | |gene_source=HGNC:23687 | ||
| + | |gene_symbol=GPR157 | ||
| + | |gene_synonyms=FLJ12132 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23687 | ||
|nearest_ensembl=ENSG00000180758 | |nearest_ensembl=ENSG00000180758 | ||
|nearest_promoter_id=NM_024980 | |nearest_promoter_id=NM_024980 | ||
|nearest_refseq=NM_024980 | |nearest_refseq=NM_024980 | ||
|nearest_unigene=Hs.632367 | |nearest_unigene=Hs.632367 | ||
| + | |num_trans=17 | ||
| + | |species=human | ||
| + | |start=9129186 | ||
| + | |strand=- | ||
|tata_box="-91(GGGCTTAAAGGC,-,0.00)" | |tata_box="-91(GGGCTTAAAGGC,-,0.00)" | ||
| + | |transcript_name=BC094733 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10207.1 | |tss_id=hg_10207.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q504W3 | ||
}} | }} | ||
Revision as of 19:10, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC094733 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | BC094733:0 ENST00000377411.4:17 NM_024980:17 uc001apq.2:17 AY768808:17 AK292888:63 AK304154:63 AK022194:85 BC018691:-97 BC156509:158 BC172507:158 DQ892804:158 DQ896051:158 KJ903272:159 ENST00000466131.1:406 uc057can.1:406 DQ576660:436 |
TATA-Box annotation
| Distance to TSS: | -23 |
|---|---|
| Nearest PromoterID: | NM_024980 |
| Entrez ID: | 80045 |
| Nearest Unigene: | Hs.632367 |
| Nearest Refseq: | NM_024980 |
| Nearest Ensembl: | ENSG00000180758 |
| Gene Name: | G protein-coupled receptor 157 |
| Gene Alias: | - |
| Gene Description: | G protein-coupled receptor 157 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.80597 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-91(GGGCTTAAAGGC,-,0.00)" |
