Difference between revisions of "TSS:Hg 102072.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.155 |distance_to_tss=-270 |entrez_id=158405 |gc_percent=0.726368 |gene_alias=- |gene_description=KIAA1958 |gene_name=KIAA1958 |gene_type=protein-cod...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AK131020:0 ENST00000463223.1:19 uc064vcn.1:19 ENST00000460965.1:165 uc064vcm.1:165 ENST00000457681.1:-478 uc064vcl.1:-478 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| + | |distance=0 | ||
|distance_to_tss=-270 | |distance_to_tss=-270 | ||
| + | |end=112486726 | ||
|entrez_id=158405 | |entrez_id=158405 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=KIAA1958 | |gene_description=KIAA1958 | ||
| − | |gene_name= | + | |gene_id=100133204 |
| + | |gene_name=chromosome 9 open reading frame 147 | ||
| + | |gene_source=HGNC:31438 | ||
| + | |gene_symbol=C9orf147 | ||
| + | |gene_synonyms=bA32M23.3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:31438 | ||
|nearest_ensembl=ENSG00000165185 | |nearest_ensembl=ENSG00000165185 | ||
|nearest_promoter_id=NM_001287036 | |nearest_promoter_id=NM_001287036 | ||
|nearest_refseq=NM_133465 | |nearest_refseq=NM_133465 | ||
|nearest_unigene=Hs.656619 | |nearest_unigene=Hs.656619 | ||
| + | |num_trans=7 | ||
| + | |species=human | ||
| + | |start=112486669 | ||
| + | |strand=- | ||
| + | |transcript_name=AK131020 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102072.1 | |tss_id=hg_102072.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:10, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK131020 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | AK131020:0 ENST00000463223.1:19 uc064vcn.1:19 ENST00000460965.1:165 uc064vcm.1:165 ENST00000457681.1:-478 uc064vcl.1:-478 |
TATA-Box annotation
| Distance to TSS: | -270 |
|---|---|
| Nearest PromoterID: | NM_001287036 |
| Entrez ID: | 158405 |
| Nearest Unigene: | Hs.656619 |
| Nearest Refseq: | NM_133465 |
| Nearest Ensembl: | ENSG00000165185 |
| Gene Name: | chromosome 9 open reading frame 147 |
| Gene Alias: | - |
| Gene Description: | KIAA1958 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
