Difference between revisions of "TSS:Hg 102095.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.075 |distance_to_tss=180 |entrez_id=246184 |gc_percent=0.626866 |gene_alias=ANAPC12|APC12|C9orf17 |gene_description=cell division cycle 26 |gene_nam...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |APC12= | ||
| + | |C9orf17= | ||
| + | |all_trans=AK307507:-21 BC042534:-124 ENST00000490408.5:-129 uc064vdn.1:-129 BC066300:-152 ENST00000374206.3:-169 NM_139286:-169 uc004bgw.4:-169 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| + | |distance=-21 | ||
|distance_to_tss=180 | |distance_to_tss=180 | ||
| + | |end=113275420 | ||
|entrez_id=246184 | |entrez_id=246184 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
|gene_alias=ANAPC12|APC12|C9orf17 | |gene_alias=ANAPC12|APC12|C9orf17 | ||
|gene_description=cell division cycle 26 | |gene_description=cell division cycle 26 | ||
| − | |gene_name= | + | |gene_id=23307 |
| + | |gene_name=FK506 binding protein 15 | ||
| + | |gene_source=HGNC:23397 | ||
| + | |gene_symbol=FKBP15 | ||
| + | |gene_synonyms=FKBP133 PPP1R76 WAFL | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23397 | ||
|nearest_ensembl=ENSG00000176386 | |nearest_ensembl=ENSG00000176386 | ||
|nearest_promoter_id=NM_139286 | |nearest_promoter_id=NM_139286 | ||
|nearest_refseq=NM_139286 | |nearest_refseq=NM_139286 | ||
|nearest_unigene=Hs.727648 | |nearest_unigene=Hs.727648 | ||
| + | |num_trans=8 | ||
| + | |species=human | ||
| + | |start=113275398 | ||
| + | |strand=- | ||
|tata_box="15(GGCTTGAAAAGA,-,0.00)" | |tata_box="15(GGCTTGAAAAGA,-,0.00)" | ||
| + | |transcript_name=AK307507 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102095.1 | |tss_id=hg_102095.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:11, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK307507 |
|---|---|
| Distance: | -21 |
| Num_trans: | 8 |
| All_trans: | AK307507:-21 BC042534:-124 ENST00000490408.5:-129 uc064vdn.1:-129 BC066300:-152 ENST00000374206.3:-169 NM_139286:-169 uc004bgw.4:-169 |
TATA-Box annotation
| Distance to TSS: | 180 |
|---|---|
| Nearest PromoterID: | NM_139286 |
| Entrez ID: | 246184 |
| Nearest Unigene: | Hs.727648 |
| Nearest Refseq: | NM_139286 |
| Nearest Ensembl: | ENSG00000176386 |
| Gene Name: | FK506 binding protein 15 |
| Gene Alias: | ANAPC12 |
| Gene Description: | cell division cycle 26 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "15(GGCTTGAAAAGA,-,0.00)" |
