Difference between revisions of "TSS:Hg 102099.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.1 |distance_to_tss=44 |entrez_id=114987 |gc_percent=0.726368 |gene_alias=- |gene_description=WD repeat domain 31 |gene_name=WDR31 |gene_type=protein...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000465979.2:0 uc064vdw.1:0 ENST00000374193.8:11 uc004bhe.4:11 AK313843:14 ENST00000374195.7:21 uc064vdu.1:21 BC012352:21 ENST00000341761.8:24 uc004bhc.4:24 AK093240:24 BC022982:27 ENST00000461942.5:37 uc004bhf.4:37 AL833635:37 ENST00000465205.2:39 uc064vdv.1:39 AK074891:39 NM_001012361:-41 NM_001006615:-41 NR_134677:-41 NM_145241:-41 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| + | |distance=0 | ||
|distance_to_tss=44 | |distance_to_tss=44 | ||
| + | |end=113340299 | ||
|entrez_id=114987 | |entrez_id=114987 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=WD repeat domain 31 | |gene_description=WD repeat domain 31 | ||
| − | |gene_name=WDR31 | + | |gene_id=114987 |
| + | |gene_name=WD repeat domain 31 | ||
| + | |gene_source=HGNC:21421 | ||
| + | |gene_symbol=WDR31 | ||
| + | |gene_synonyms=FLJ35921 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:21421 | ||
|nearest_ensembl=ENSG00000148225 | |nearest_ensembl=ENSG00000148225 | ||
|nearest_promoter_id=NM_145241 | |nearest_promoter_id=NM_145241 | ||
|nearest_refseq=NM_145241 | |nearest_refseq=NM_145241 | ||
|nearest_unigene=Hs.133331 | |nearest_unigene=Hs.133331 | ||
| + | |num_trans=22 | ||
| + | |species=human | ||
| + | |start=113340292 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000465979.2 uc064vdw.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102099.1 | |tss_id=hg_102099.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=C9JWF1 | ||
}} | }} | ||
Revision as of 19:11, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000465979.2 uc064vdw.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 22 |
| All_trans: | ENST00000465979.2:0 uc064vdw.1:0 ENST00000374193.8:11 uc004bhe.4:11 AK313843:14 ENST00000374195.7:21 uc064vdu.1:21 BC012352:21 ENST00000341761.8:24 uc004bhc.4:24 AK093240:24 BC022982:27 ENST00000461942.5:37 uc004bhf.4:37 AL833635:37 ENST00000465205.2:39 uc064vdv.1:39 AK074891:39 NM_001012361:-41 NM_001006615:-41 NR_134677:-41 NM_145241:-41 |
TATA-Box annotation
| Distance to TSS: | 44 |
|---|---|
| Nearest PromoterID: | NM_145241 |
| Entrez ID: | 114987 |
| Nearest Unigene: | Hs.133331 |
| Nearest Refseq: | NM_145241 |
| Nearest Ensembl: | ENSG00000148225 |
| Gene Name: | WD repeat domain 31 |
| Gene Alias: | - |
| Gene Description: | WD repeat domain 31 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
