Difference between revisions of "TSS:Hg 10220.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.12 |distance_to_tss=-64 |entrez_id=100506022 |gc_percent=0.666667 |gene_alias=- |gene_description=uncharacterized LOC100506022 |gene_name=LOC1005060...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=NR_104622:59 NR_104623:139 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| + | |distance=59 | ||
|distance_to_tss=-64 | |distance_to_tss=-64 | ||
| + | |end=9429065 | ||
|entrez_id=100506022 | |entrez_id=100506022 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=uncharacterized LOC100506022 | |gene_description=uncharacterized LOC100506022 | ||
| − | |gene_name=LOC100506022 | + | |gene_id=100506022 |
| + | |gene_name=uncharacterized LOC100506022 | ||
| + | |gene_source=EntrezGene:100506022 | ||
| + | |gene_symbol=LOC100506022 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id= | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_104622 | |nearest_promoter_id=NR_104622 | ||
|nearest_refseq=NR_104622 | |nearest_refseq=NR_104622 | ||
|nearest_unigene=Hs.131775 | |nearest_unigene=Hs.131775 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=9429054 | ||
| + | |strand=- | ||
| + | |transcript_name=NR_104622 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10220.1 | |tss_id=hg_10220.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:16, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NR_104622 |
|---|---|
| Distance: | 59 |
| Num_trans: | 2 |
| All_trans: | NR_104622:59 NR_104623:139 |
TATA-Box annotation
| Distance to TSS: | -64 |
|---|---|
| Nearest PromoterID: | NR_104622 |
| Entrez ID: | 100506022 |
| Nearest Unigene: | Hs.131775 |
| Nearest Refseq: | NR_104622 |
| Nearest Ensembl: | |
| Gene Name: | uncharacterized LOC100506022 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100506022 |
| Gene Type: | ncRNA |
| CpG%: | 0.12 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
