Difference between revisions of "TSS:Hg 10225.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.04 |distance_to_tss=173 |entrez_id=101929074 |gc_percent=0.641791 |gene_alias=- |gene_description=PIK3CD antisense RNA 2 |gene_name=PIK3CD-AS2 |gene...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000415330.2:-146 uc057caz.1:-146 BC071786:-149 BC038541:-160 NR_126367:-165 NR_126366:-165 NR_126368:-165 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| + | |distance=-146 | ||
|distance_to_tss=173 | |distance_to_tss=173 | ||
| + | |end=9687409 | ||
|entrez_id=101929074 | |entrez_id=101929074 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=PIK3CD antisense RNA 2 | |gene_description=PIK3CD antisense RNA 2 | ||
| − | |gene_name=PIK3CD-AS2 | + | |gene_id=101929074 |
| + | |gene_name=PIK3CD antisense RNA 2 | ||
| + | |gene_source=HGNC:51334 | ||
| + | |gene_symbol=PIK3CD-AS2 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:51334 | ||
|nearest_ensembl=ENSG00000231789 | |nearest_ensembl=ENSG00000231789 | ||
|nearest_promoter_id=NR_126366 | |nearest_promoter_id=NR_126366 | ||
|nearest_refseq=NR_126366 | |nearest_refseq=NR_126366 | ||
|nearest_unigene=Hs.661762 | |nearest_unigene=Hs.661762 | ||
| + | |num_trans=7 | ||
| + | |species=human | ||
| + | |start=9687393 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000415330.2 uc057caz.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10225.1 | |tss_id=hg_10225.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:18, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000415330.2 uc057caz.1 |
|---|---|
| Distance: | -146 |
| Num_trans: | 7 |
| All_trans: | ENST00000415330.2:-146 uc057caz.1:-146 BC071786:-149 BC038541:-160 NR_126367:-165 NR_126366:-165 NR_126368:-165 |
TATA-Box annotation
| Distance to TSS: | 173 |
|---|---|
| Nearest PromoterID: | NR_126366 |
| Entrez ID: | 101929074 |
| Nearest Unigene: | Hs.661762 |
| Nearest Refseq: | NR_126366 |
| Nearest Ensembl: | ENSG00000231789 |
| Gene Name: | PIK3CD antisense RNA 2 |
| Gene Alias: | - |
| Gene Description: | PIK3CD antisense RNA 2 |
| Gene Type: | ncRNA |
| CpG%: | 0.04 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
