Difference between revisions of "TSS:Hg 102300.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.115 |distance_to_tss=76 |entrez_id=1955 |gc_percent=0.711443 |gene_alias=EGFL5 |gene_description=multiple EGF like domains 9 |gene_name=MEGF9 |gene_...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AY358370:-39 ENST00000373930.3:-50 uc022bms.2:-50 NM_001080497:-67 AK295380:-67 BC156248:67 BC157029:67 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| + | |distance=-39 | ||
|distance_to_tss=76 | |distance_to_tss=76 | ||
| + | |end=120714420 | ||
|entrez_id=1955 | |entrez_id=1955 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
|gene_alias=EGFL5 | |gene_alias=EGFL5 | ||
|gene_description=multiple EGF like domains 9 | |gene_description=multiple EGF like domains 9 | ||
| − | |gene_name=MEGF9 | + | |gene_id=1955 |
| + | |gene_name=multiple EGF like domains 9 | ||
| + | |gene_source=HGNC:3234 | ||
| + | |gene_symbol=MEGF9 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:3234 | ||
|nearest_ensembl=ENSG00000106780 | |nearest_ensembl=ENSG00000106780 | ||
|nearest_promoter_id=NM_001080497 | |nearest_promoter_id=NM_001080497 | ||
|nearest_refseq=NM_001080497 | |nearest_refseq=NM_001080497 | ||
|nearest_unigene=Hs.744903 | |nearest_unigene=Hs.744903 | ||
| + | |num_trans=7 | ||
| + | |species=human | ||
| + | |start=120714402 | ||
| + | |strand=- | ||
| + | |transcript_name=AY358370 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102300.1 | |tss_id=hg_102300.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:20, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AY358370 |
|---|---|
| Distance: | -39 |
| Num_trans: | 7 |
| All_trans: | AY358370:-39 ENST00000373930.3:-50 uc022bms.2:-50 NM_001080497:-67 AK295380:-67 BC156248:67 BC157029:67 |
TATA-Box annotation
| Distance to TSS: | 76 |
|---|---|
| Nearest PromoterID: | NM_001080497 |
| Entrez ID: | 1955 |
| Nearest Unigene: | Hs.744903 |
| Nearest Refseq: | NM_001080497 |
| Nearest Ensembl: | ENSG00000106780 |
| Gene Name: | multiple EGF like domains 9 |
| Gene Alias: | EGFL5 |
| Gene Description: | multiple EGF like domains 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
