Difference between revisions of "TSS:Hg 102333.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=-2481 |entrez_id=7185 |gc_percent=0.427861 |gene_alias=EBI6|MGC:10353 |gene_description=TNF receptor associated factor 1 |gene_name...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |MGC:10353= | ||
| + | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| + | |distance= | ||
|distance_to_tss=-2481 | |distance_to_tss=-2481 | ||
| + | |end=120931671 | ||
|entrez_id=7185 | |entrez_id=7185 | ||
|gc_percent=0.427861 | |gc_percent=0.427861 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_005658 | |nearest_refseq=NM_005658 | ||
|nearest_unigene=Hs.531251 | |nearest_unigene=Hs.531251 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=120931636 | ||
| + | |strand=- | ||
|tata_box="59(GCTTTTATAGGC,+,0.00)" | |tata_box="59(GCTTTTATAGGC,+,0.00)" | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_102333.1 | |tss_id=hg_102333.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 19:21, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -2481 |
|---|---|
| Nearest PromoterID: | NM_001190945 |
| Entrez ID: | 7185 |
| Nearest Unigene: | Hs.531251 |
| Nearest Refseq: | NM_005658 |
| Nearest Ensembl: | ENSG00000056558 |
| Gene Name: | TRAF1 |
| Gene Alias: | EBI6 |
| Gene Description: | TNF receptor associated factor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "59(GCTTTTATAGGC,+,0.00)" |
