Difference between revisions of "TSS:Hg 102343.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.075 |distance_to_tss=203 |entrez_id=51552 |gc_percent=0.661692 |gene_alias=FBP|RAB-14 |gene_description="RAB14, member RAS oncogene family" |gene_na...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |RAB-14= | ||
| + | |all_trans=ENST00000373840.8:0 uc004blc.4:0 AK023524:0 AK090889:0 BC006081:0 BC013057:0 AL162081:29 AF112206:141 NM_016322:-155 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| + | |distance=0 | ||
|distance_to_tss=203 | |distance_to_tss=203 | ||
| + | |end=121201932 | ||
|entrez_id=51552 | |entrez_id=51552 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
|gene_alias=FBP|RAB-14 | |gene_alias=FBP|RAB-14 | ||
|gene_description="RAB14, member RAS oncogene family" | |gene_description="RAB14, member RAS oncogene family" | ||
| − | |gene_name=RAB14 | + | |gene_id=51552 |
| + | |gene_name="RAB14, member RAS oncogene family" | ||
| + | |gene_source=HGNC:16524 | ||
| + | |gene_symbol=RAB14 | ||
| + | |gene_synonyms=FBP RAB-14 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:16524 | ||
|nearest_ensembl=ENSG00000119396 | |nearest_ensembl=ENSG00000119396 | ||
|nearest_promoter_id=NM_016322 | |nearest_promoter_id=NM_016322 | ||
|nearest_refseq=NM_016322 | |nearest_refseq=NM_016322 | ||
|nearest_unigene=Hs.371563 | |nearest_unigene=Hs.371563 | ||
| + | |num_trans=9 | ||
| + | |species=human | ||
| + | |start=121201836 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000373840.8 uc004blc.4 AK023524 AK090889 BC006081 BC013057 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102343.1 | |tss_id=hg_102343.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A024R845 P61106 | ||
}} | }} | ||
Revision as of 19:22, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000373840.8 uc004blc.4 AK023524 AK090889 BC006081 BC013057 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENST00000373840.8:0 uc004blc.4:0 AK023524:0 AK090889:0 BC006081:0 BC013057:0 AL162081:29 AF112206:141 NM_016322:-155 |
TATA-Box annotation
| Distance to TSS: | 203 |
|---|---|
| Nearest PromoterID: | NM_016322 |
| Entrez ID: | 51552 |
| Nearest Unigene: | Hs.371563 |
| Nearest Refseq: | NM_016322 |
| Nearest Ensembl: | ENSG00000119396 |
| Gene Name: | "RAB14, member RAS oncogene family" |
| Gene Alias: | FBP |
| Gene Description: | "RAB14, member RAS oncogene family" |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
