Difference between revisions of "TSS:Hg 102374.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=129907 |entrez_id=158135 |gc_percent=0.472637 |gene_alias=C9orf20|bA244O19.1 |gene_description=tubulin tyrosine ligase like 11 |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000411790.1:-13 uc004bls.1:-13 BC039180:-13 | ||
| + | |bA244O19.1= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=-13 | ||
|distance_to_tss=129907 | |distance_to_tss=129907 | ||
| + | |end=121963706 | ||
|entrez_id=158135 | |entrez_id=158135 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
|gene_alias=C9orf20|bA244O19.1 | |gene_alias=C9orf20|bA244O19.1 | ||
|gene_description=tubulin tyrosine ligase like 11 | |gene_description=tubulin tyrosine ligase like 11 | ||
| − | |gene_name=TTLL11 | + | |gene_id=105376261 |
| + | |gene_name=TTLL11 intronic transcript 1 | ||
| + | |gene_source=HGNC:24214 | ||
| + | |gene_symbol=TTLL11-IT1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:24214 | ||
|nearest_ensembl=ENSG00000175764 | |nearest_ensembl=ENSG00000175764 | ||
|nearest_promoter_id=NM_001139442 | |nearest_promoter_id=NM_001139442 | ||
|nearest_refseq=NM_194252 | |nearest_refseq=NM_194252 | ||
|nearest_unigene=Hs.438937 | |nearest_unigene=Hs.438937 | ||
| + | |num_trans=3 | ||
| + | |species=human | ||
| + | |start=121963692 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000411790.1 uc004bls.1 BC039180 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102374.1 | |tss_id=hg_102374.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:23, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000411790.1 uc004bls.1 BC039180 |
|---|---|
| Distance: | -13 |
| Num_trans: | 3 |
| All_trans: | ENST00000411790.1:-13 uc004bls.1:-13 BC039180:-13 |
TATA-Box annotation
| Distance to TSS: | 129907 |
|---|---|
| Nearest PromoterID: | NM_001139442 |
| Entrez ID: | 158135 |
| Nearest Unigene: | Hs.438937 |
| Nearest Refseq: | NM_194252 |
| Nearest Ensembl: | ENSG00000175764 |
| Gene Name: | TTLL11 intronic transcript 1 |
| Gene Alias: | C9orf20 |
| Gene Description: | tubulin tyrosine ligase like 11 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
