Difference between revisions of "TSS:Hg 102391.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.12 |distance_to_tss=103 |entrez_id=92400 |gc_percent=0.686567 |gene_alias=- |gene_description=RNA binding motif protein 18 |gene_name=RBM18 |gene_ty...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AL389986:-26 ENST00000483428.1:-28 uc010mvy.3:-28 AK310807:-40 BC008942:-45 BC019319:-45 AK301050:-54 AK310008:-55 ENST00000417201.3:-73 uc004bma.3:-73 AK057676:-73 AK299625:-73 NM_033117:-98 NR_027126:-98 NR_027125:-98 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| + | |distance=-26 | ||
|distance_to_tss=103 | |distance_to_tss=103 | ||
| + | |end=122264766 | ||
|entrez_id=92400 | |entrez_id=92400 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=RNA binding motif protein 18 | |gene_description=RNA binding motif protein 18 | ||
| − | |gene_name=RBM18 | + | |gene_id=92400 |
| + | |gene_name=RNA binding motif protein 18 | ||
| + | |gene_source=HGNC:28413 | ||
| + | |gene_symbol=RBM18 | ||
| + | |gene_synonyms=MGC2734 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:28413 | ||
|nearest_ensembl=ENSG00000119446 | |nearest_ensembl=ENSG00000119446 | ||
|nearest_promoter_id=NR_027126 | |nearest_promoter_id=NR_027126 | ||
|nearest_refseq=NM_033117 | |nearest_refseq=NM_033117 | ||
|nearest_unigene=Hs.415842 | |nearest_unigene=Hs.415842 | ||
| + | |num_trans=15 | ||
| + | |species=human | ||
| + | |start=122264755 | ||
| + | |strand=- | ||
| + | |transcript_name=AL389986 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102391.1 | |tss_id=hg_102391.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:24, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AL389986 |
|---|---|
| Distance: | -26 |
| Num_trans: | 15 |
| All_trans: | AL389986:-26 ENST00000483428.1:-28 uc010mvy.3:-28 AK310807:-40 BC008942:-45 BC019319:-45 AK301050:-54 AK310008:-55 ENST00000417201.3:-73 uc004bma.3:-73 AK057676:-73 AK299625:-73 NM_033117:-98 NR_027126:-98 NR_027125:-98 |
TATA-Box annotation
| Distance to TSS: | 103 |
|---|---|
| Nearest PromoterID: | NR_027126 |
| Entrez ID: | 92400 |
| Nearest Unigene: | Hs.415842 |
| Nearest Refseq: | NM_033117 |
| Nearest Ensembl: | ENSG00000119446 |
| Gene Name: | RNA binding motif protein 18 |
| Gene Alias: | - |
| Gene Description: | RNA binding motif protein 18 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
