Difference between revisions of "TSS:Hg 102419.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.175 |distance_to_tss=9 |entrez_id=57706 |gc_percent=0.79602 |gene_alias=FAM31A|KIAA1608 |gene_description=DENN domain containing 1A |gene_name=DENND...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |KIAA1608= | ||
| + | |all_trans=ENST00000373620.7:0 NM_020946:0 NM_024820:0 uc004boa.2:0 AK295710:0 BC009616:0 AK024782:0 AK225104:0 ENST00000373624.6:1 ENST00000373618.1:-1 uc004bnz.2:1 uc004boc.4:-1 BC039703:128 BC028061:130 KJ894450:202 JF432807:202 CU691746:202 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.175 | |cpg_percent=0.175 | ||
| + | |distance=0 | ||
|distance_to_tss=9 | |distance_to_tss=9 | ||
| + | |end=123930151 | ||
|entrez_id=57706 | |entrez_id=57706 | ||
|gc_percent=0.79602 | |gc_percent=0.79602 | ||
|gene_alias=FAM31A|KIAA1608 | |gene_alias=FAM31A|KIAA1608 | ||
|gene_description=DENN domain containing 1A | |gene_description=DENN domain containing 1A | ||
| − | |gene_name=DENND1A | + | |gene_id=57706 |
| + | |gene_name=DENN domain containing 1A | ||
| + | |gene_source=HGNC:29324 | ||
| + | |gene_symbol=DENND1A | ||
| + | |gene_synonyms=FAM31A FLJ21129 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:29324 | ||
|nearest_ensembl=ENSG00000119522 | |nearest_ensembl=ENSG00000119522 | ||
|nearest_promoter_id=NM_020946 | |nearest_promoter_id=NM_020946 | ||
|nearest_refseq=NM_020946 | |nearest_refseq=NM_020946 | ||
|nearest_unigene=Hs.744995 | |nearest_unigene=Hs.744995 | ||
| + | |num_trans=17 | ||
| + | |species=human | ||
| + | |start=123930107 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000373620.7 NM_020946 NM_024820 uc004boa.2 AK295710 BC009616 AK024782 AK225104 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102419.1 | |tss_id=hg_102419.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q8TEH3 Q9HCG4 | ||
}} | }} | ||
Revision as of 19:25, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000373620.7 NM_020946 NM_024820 uc004boa.2 AK295710 BC009616 AK024782 AK225104 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENST00000373620.7:0 NM_020946:0 NM_024820:0 uc004boa.2:0 AK295710:0 BC009616:0 AK024782:0 AK225104:0 ENST00000373624.6:1 ENST00000373618.1:-1 uc004bnz.2:1 uc004boc.4:-1 BC039703:128 BC028061:130 KJ894450:202 JF432807:202 CU691746:202 |
TATA-Box annotation
| Distance to TSS: | 9 |
|---|---|
| Nearest PromoterID: | NM_020946 |
| Entrez ID: | 57706 |
| Nearest Unigene: | Hs.744995 |
| Nearest Refseq: | NM_020946 |
| Nearest Ensembl: | ENSG00000119522 |
| Gene Name: | DENN domain containing 1A |
| Gene Alias: | FAM31A |
| Gene Description: | DENN domain containing 1A |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.79602 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
