Difference between revisions of "TSS:Hg 102441.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=-28555 |entrez_id=2516 |gc_percent=0.512438 |gene_alias=AD4BP|ELP|FTZ1|FTZF1|POF7|SF-1|SF1|SPGF8|SRXY3|hSF-1 |gene_description=n...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ELP= | ||
| + | |FTZ1= | ||
| + | |FTZF1= | ||
| + | |POF7= | ||
| + | |SF-1= | ||
| + | |SF1= | ||
| + | |SPGF8= | ||
| + | |SRXY3= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| + | |distance= | ||
|distance_to_tss=-28555 | |distance_to_tss=-28555 | ||
| + | |end=124535984 | ||
|entrez_id=2516 | |entrez_id=2516 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
| Line 8: | Line 19: | ||
|gene_name=NR5A1 | |gene_name=NR5A1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hSF-1= | ||
|nearest_ensembl=ENSG00000136931 | |nearest_ensembl=ENSG00000136931 | ||
|nearest_promoter_id=NM_004959 | |nearest_promoter_id=NM_004959 | ||
|nearest_refseq=NM_004959 | |nearest_refseq=NM_004959 | ||
|nearest_unigene=Hs.495108 | |nearest_unigene=Hs.495108 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=124535965 | ||
| + | |strand=- | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_102441.1 | |tss_id=hg_102441.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 19:26, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -28555 |
|---|---|
| Nearest PromoterID: | NM_004959 |
| Entrez ID: | 2516 |
| Nearest Unigene: | Hs.495108 |
| Nearest Refseq: | NM_004959 |
| Nearest Ensembl: | ENSG00000136931 |
| Gene Name: | NR5A1 |
| Gene Alias: | AD4BP |
| Gene Description: | nuclear receptor subfamily 5 group A member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
