Difference between revisions of "TSS:Hg 102442.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=-62570 |entrez_id=100379345 |gc_percent=0.462687 |gene_alias=- |gene_description=MIR181A2 host gene |gene_name=MIR181A2HG |gene...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000475178.1:34 uc064vqf.1:34 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| + | |distance=34 | ||
|distance_to_tss=-62570 | |distance_to_tss=-62570 | ||
| + | |end=124595891 | ||
|entrez_id=100379345 | |entrez_id=100379345 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=MIR181A2 host gene | |gene_description=MIR181A2 host gene | ||
| − | |gene_name= | + | |gene_id=2649 |
| + | |gene_name=nuclear receptor subfamily 6 group A member 1 | ||
| + | |gene_source=HGNC:7985 | ||
| + | |gene_symbol=NR6A1 | ||
| + | |gene_synonyms=CT150 GCNF1 RTR | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:7985 | ||
|nearest_ensembl=ENSG00000224020 | |nearest_ensembl=ENSG00000224020 | ||
|nearest_promoter_id=NR_038975 | |nearest_promoter_id=NR_038975 | ||
|nearest_refseq=NR_038975 | |nearest_refseq=NR_038975 | ||
|nearest_unigene=Hs.660412 | |nearest_unigene=Hs.660412 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=124595841 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000475178.1 uc064vqf.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_102442.1 | |tss_id=hg_102442.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=C9JDI9 | ||
}} | }} | ||
Revision as of 19:26, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000475178.1 uc064vqf.1 |
|---|---|
| Distance: | 34 |
| Num_trans: | 2 |
| All_trans: | ENST00000475178.1:34 uc064vqf.1:34 |
TATA-Box annotation
| Distance to TSS: | -62570 |
|---|---|
| Nearest PromoterID: | NR_038975 |
| Entrez ID: | 100379345 |
| Nearest Unigene: | Hs.660412 |
| Nearest Refseq: | NR_038975 |
| Nearest Ensembl: | ENSG00000224020 |
| Gene Name: | nuclear receptor subfamily 6 group A member 1 |
| Gene Alias: | - |
| Gene Description: | MIR181A2 host gene |
| Gene Type: | ncRNA |
| CpG%: | 0.025 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
