Difference between revisions of "TSS:Hg 102458.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=25431 |entrez_id=81873 |gc_percent=0.383085 |gene_alias=ARC16-2 |gene_description=actin related protein 2/3 complex subunit 5 l...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000362443.1:0 uc064vqr.1:0 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| + | |distance=0 | ||
|distance_to_tss=25431 | |distance_to_tss=25431 | ||
| + | |end=124887551 | ||
|entrez_id=81873 | |entrez_id=81873 | ||
|gc_percent=0.383085 | |gc_percent=0.383085 | ||
|gene_alias=ARC16-2 | |gene_alias=ARC16-2 | ||
|gene_description=actin related protein 2/3 complex subunit 5 like | |gene_description=actin related protein 2/3 complex subunit 5 like | ||
| − | |gene_name= | + | |gene_id= |
| + | |gene_name="RNA, U4 small nuclear 82, pseudogene" | ||
| + | |gene_source=HGNC:47018 | ||
| + | |gene_symbol=RNU4-82P | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:47018 | ||
|nearest_ensembl=ENSG00000136950 | |nearest_ensembl=ENSG00000136950 | ||
|nearest_promoter_id=NM_030978 | |nearest_promoter_id=NM_030978 | ||
|nearest_refseq=NM_030978 | |nearest_refseq=NM_030978 | ||
|nearest_unigene=Hs.132499 | |nearest_unigene=Hs.132499 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=124887546 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000362443.1 uc064vqr.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_102458.1 | |tss_id=hg_102458.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:27, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000362443.1 uc064vqr.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2 |
| All_trans: | ENST00000362443.1:0 uc064vqr.1:0 |
TATA-Box annotation
| Distance to TSS: | 25431 |
|---|---|
| Nearest PromoterID: | NM_030978 |
| Entrez ID: | 81873 |
| Nearest Unigene: | Hs.132499 |
| Nearest Refseq: | NM_030978 |
| Nearest Ensembl: | ENSG00000136950 |
| Gene Name: | "RNA, U4 small nuclear 82, pseudogene" |
| Gene Alias: | ARC16-2 |
| Gene Description: | actin related protein 2/3 complex subunit 5 like |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.383085 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
