Difference between revisions of "TSS:Hg 102461.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-6926 |entrez_id=2800 |gc_percent=0.378109 |gene_alias=golgin-97 |gene_description=golgin A1 |gene_name=GOLGA1 |gene_type=protei...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000421514.1:9 uc064vqv.1:9 ENST00000605438.1:-447 uc064vqw.1:-447 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=9 | ||
|distance_to_tss=-6926 | |distance_to_tss=-6926 | ||
| + | |end=124948045 | ||
|entrez_id=2800 | |entrez_id=2800 | ||
|gc_percent=0.378109 | |gc_percent=0.378109 | ||
|gene_alias=golgin-97 | |gene_alias=golgin-97 | ||
|gene_description=golgin A1 | |gene_description=golgin A1 | ||
| − | |gene_name=GOLGA1 | + | |gene_id=2800 |
| + | |gene_name=golgin A1 | ||
| + | |gene_source=HGNC:4424 | ||
| + | |gene_symbol=GOLGA1 | ||
| + | |gene_synonyms=MGC33154 golgin-97 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:4424 | ||
|nearest_ensembl=ENSG00000136935 | |nearest_ensembl=ENSG00000136935 | ||
|nearest_promoter_id=NM_002077 | |nearest_promoter_id=NM_002077 | ||
|nearest_refseq=NM_002077 | |nearest_refseq=NM_002077 | ||
|nearest_unigene=Hs.59504 | |nearest_unigene=Hs.59504 | ||
| + | |num_trans=4 | ||
| + | |species=human | ||
| + | |start=124948021 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000421514.1 uc064vqv.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_102461.1 | |tss_id=hg_102461.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5T165 | ||
}} | }} | ||
Revision as of 19:27, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000421514.1 uc064vqv.1 |
|---|---|
| Distance: | 9 |
| Num_trans: | 4 |
| All_trans: | ENST00000421514.1:9 uc064vqv.1:9 ENST00000605438.1:-447 uc064vqw.1:-447 |
TATA-Box annotation
| Distance to TSS: | -6926 |
|---|---|
| Nearest PromoterID: | NM_002077 |
| Entrez ID: | 2800 |
| Nearest Unigene: | Hs.59504 |
| Nearest Refseq: | NM_002077 |
| Nearest Ensembl: | ENSG00000136935 |
| Gene Name: | golgin A1 |
| Gene Alias: | golgin-97 |
| Gene Description: | golgin A1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.378109 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
