Difference between revisions of "TSS:Hg 10248.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=17002 |entrez_id=56998 |gc_percent=0.537313 |gene_alias=ICAT |gene_description=catenin beta interacting protein 1 |gene_name=CT...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000377258.5:14 uc057cbj.1:14 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=14 | ||
|distance_to_tss=17002 | |distance_to_tss=17002 | ||
| + | |end=9893262 | ||
|entrez_id=56998 | |entrez_id=56998 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
|gene_alias=ICAT | |gene_alias=ICAT | ||
|gene_description=catenin beta interacting protein 1 | |gene_description=catenin beta interacting protein 1 | ||
| − | |gene_name=CTNNBIP1 | + | |gene_id=56998 |
| + | |gene_name=catenin beta interacting protein 1 | ||
| + | |gene_source=HGNC:16913 | ||
| + | |gene_symbol=CTNNBIP1 | ||
| + | |gene_synonyms=ICAT MGC15093 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:16913 | ||
|nearest_ensembl=ENSG00000178585 | |nearest_ensembl=ENSG00000178585 | ||
|nearest_promoter_id=NM_020248 | |nearest_promoter_id=NM_020248 | ||
|nearest_refseq=NM_020248 | |nearest_refseq=NM_020248 | ||
|nearest_unigene=Hs.463759 | |nearest_unigene=Hs.463759 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=9893250 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000377258.5 uc057cbj.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10248.1 | |tss_id=hg_10248.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A024R4D7 Q9NSA3 | ||
}} | }} | ||
Revision as of 19:28, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000377258.5 uc057cbj.1 |
|---|---|
| Distance: | 14 |
| Num_trans: | 2 |
| All_trans: | ENST00000377258.5:14 uc057cbj.1:14 |
TATA-Box annotation
| Distance to TSS: | 17002 |
|---|---|
| Nearest PromoterID: | NM_020248 |
| Entrez ID: | 56998 |
| Nearest Unigene: | Hs.463759 |
| Nearest Refseq: | NM_020248 |
| Nearest Ensembl: | ENSG00000178585 |
| Gene Name: | catenin beta interacting protein 1 |
| Gene Alias: | ICAT |
| Gene Description: | catenin beta interacting protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
