Difference between revisions of "TSS:Hg 102483.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.095 |distance_to_tss=536 |entrez_id=3309 |gc_percent=0.59204 |gene_alias=BIP|GRP78|HEL-S-89n|MIF2 |gene_description=heat shock protein family A (Hsp...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |GRP78= | ||
| + | |HEL-S-89n= | ||
| + | |MIF2= | ||
| + | |all_trans=AF188611:-198 AF216292:-254 DQ892173:-254 DQ895368:-254 AB527282:-254 AJ271729:-267 EU794617:-267 ENST00000324460.6:-458 uc004bpn.4:-458 BC020235:-458 AK293604:-471 X87949:-476 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| + | |distance=-198 | ||
|distance_to_tss=536 | |distance_to_tss=536 | ||
| + | |end=125240872 | ||
|entrez_id=3309 | |entrez_id=3309 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
|gene_alias=BIP|GRP78|HEL-S-89n|MIF2 | |gene_alias=BIP|GRP78|HEL-S-89n|MIF2 | ||
|gene_description=heat shock protein family A (Hsp70) member 5 | |gene_description=heat shock protein family A (Hsp70) member 5 | ||
| − | |gene_name=HSPA5 | + | |gene_id=3309 |
| + | |gene_name=heat shock protein family A (Hsp70) member 5 | ||
| + | |gene_source=HGNC:5238 | ||
| + | |gene_symbol=HSPA5 | ||
| + | |gene_synonyms=BiP | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:5238 | ||
|nearest_ensembl=ENSG00000044574 | |nearest_ensembl=ENSG00000044574 | ||
|nearest_promoter_id=NM_005347 | |nearest_promoter_id=NM_005347 | ||
|nearest_refseq=NM_005347 | |nearest_refseq=NM_005347 | ||
|nearest_unigene=Hs.743241 | |nearest_unigene=Hs.743241 | ||
| + | |num_trans=12 | ||
| + | |species=human | ||
| + | |start=125240829 | ||
| + | |strand=- | ||
| + | |transcript_name=AF188611 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102483.1 | |tss_id=hg_102483.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:28, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AF188611 |
|---|---|
| Distance: | -198 |
| Num_trans: | 12 |
| All_trans: | AF188611:-198 AF216292:-254 DQ892173:-254 DQ895368:-254 AB527282:-254 AJ271729:-267 EU794617:-267 ENST00000324460.6:-458 uc004bpn.4:-458 BC020235:-458 AK293604:-471 X87949:-476 |
TATA-Box annotation
| Distance to TSS: | 536 |
|---|---|
| Nearest PromoterID: | NM_005347 |
| Entrez ID: | 3309 |
| Nearest Unigene: | Hs.743241 |
| Nearest Refseq: | NM_005347 |
| Nearest Ensembl: | ENSG00000044574 |
| Gene Name: | heat shock protein family A (Hsp70) member 5 |
| Gene Alias: | BIP |
| Gene Description: | heat shock protein family A (Hsp70) member 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
