Difference between revisions of "TSS:Hg 102486.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.035 |distance_to_tss=185605 |entrez_id=26130 |gc_percent=0.497512 |gene_alias=GAPEX5|GAPex-5|RAP6 |gene_description=GTPase activating protein and VP...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |GAPex-5= | ||
| + | |RAP6= | ||
| + | |all_trans=ENST00000444226.1:-2 uc064vry.1:-2 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| + | |distance=-2 | ||
|distance_to_tss=185605 | |distance_to_tss=185605 | ||
| + | |end=125484499 | ||
|entrez_id=26130 | |entrez_id=26130 | ||
|gc_percent=0.497512 | |gc_percent=0.497512 | ||
|gene_alias=GAPEX5|GAPex-5|RAP6 | |gene_alias=GAPEX5|GAPex-5|RAP6 | ||
|gene_description=GTPase activating protein and VPS9 domains 1 | |gene_description=GTPase activating protein and VPS9 domains 1 | ||
| − | |gene_name= | + | |gene_id=79109 |
| + | |gene_name=mitogen-activated protein kinase associated protein 1 | ||
| + | |gene_source=HGNC:18752 | ||
| + | |gene_symbol=MAPKAP1 | ||
| + | |gene_synonyms=MGC2745 MIP1 SIN1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:18752 | ||
|nearest_ensembl=ENSG00000165219 | |nearest_ensembl=ENSG00000165219 | ||
|nearest_promoter_id=NM_001282681 | |nearest_promoter_id=NM_001282681 | ||
|nearest_refseq=NM_015635 | |nearest_refseq=NM_015635 | ||
|nearest_unigene=Hs.42376 | |nearest_unigene=Hs.42376 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=125484490 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000444226.1 uc064vry.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_102486.1 | |tss_id=hg_102486.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=H0Y7F8 | ||
}} | }} | ||
Revision as of 19:28, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000444226.1 uc064vry.1 |
|---|---|
| Distance: | -2 |
| Num_trans: | 2 |
| All_trans: | ENST00000444226.1:-2 uc064vry.1:-2 |
TATA-Box annotation
| Distance to TSS: | 185605 |
|---|---|
| Nearest PromoterID: | NM_001282681 |
| Entrez ID: | 26130 |
| Nearest Unigene: | Hs.42376 |
| Nearest Refseq: | NM_015635 |
| Nearest Ensembl: | ENSG00000165219 |
| Gene Name: | mitogen-activated protein kinase associated protein 1 |
| Gene Alias: | GAPEX5 |
| Gene Description: | GTPase activating protein and VPS9 domains 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
