Difference between revisions of "TSS:Hg 1025.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.135 |distance_to_tss=43 |entrez_id=84966 |gc_percent=0.766169 |gene_alias=- |gene_description=immunoglobin superfamily member 21 |gene_name=IGSF21 |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=BC007618:12 ENST00000251296.3:-18 NM_032880:-18 uc001bau.3:-18 AK075316:-18 EU832427:311 EU832342:311 AB590592:313 AK294121:363 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| + | |distance=12 | ||
|distance_to_tss=43 | |distance_to_tss=43 | ||
| + | |end=18107814 | ||
|entrez_id=84966 | |entrez_id=84966 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=immunoglobin superfamily member 21 | |gene_description=immunoglobin superfamily member 21 | ||
| − | |gene_name=IGSF21 | + | |gene_id=84966 |
| + | |gene_name=immunoglobin superfamily member 21 | ||
| + | |gene_source=HGNC:28246 | ||
| + | |gene_symbol=IGSF21 | ||
| + | |gene_synonyms=MGC15730 RP11-121A23.1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:28246 | ||
|nearest_ensembl=ENSG00000117154 | |nearest_ensembl=ENSG00000117154 | ||
|nearest_promoter_id=NM_032880 | |nearest_promoter_id=NM_032880 | ||
|nearest_refseq=NM_032880 | |nearest_refseq=NM_032880 | ||
|nearest_unigene=Hs.212511 | |nearest_unigene=Hs.212511 | ||
| + | |num_trans=9 | ||
| + | |species=human | ||
| + | |start=18107763 | ||
| + | |strand=+ | ||
| + | |transcript_name=BC007618 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_1025.1 | |tss_id=hg_1025.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:29, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC007618 |
|---|---|
| Distance: | 12 |
| Num_trans: | 9 |
| All_trans: | BC007618:12 ENST00000251296.3:-18 NM_032880:-18 uc001bau.3:-18 AK075316:-18 EU832427:311 EU832342:311 AB590592:313 AK294121:363 |
TATA-Box annotation
| Distance to TSS: | 43 |
|---|---|
| Nearest PromoterID: | NM_032880 |
| Entrez ID: | 84966 |
| Nearest Unigene: | Hs.212511 |
| Nearest Refseq: | NM_032880 |
| Nearest Ensembl: | ENSG00000117154 |
| Gene Name: | immunoglobin superfamily member 21 |
| Gene Alias: | - |
| Gene Description: | immunoglobin superfamily member 21 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
