Difference between revisions of "TSS:Hg 102537.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=2 |entrez_id=26783 |gc_percent=0.497512 |gene_alias=RNU65|U65 |gene_description="small nucleolar RNA, H/ACA box 65" |gene_name=...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |U65= | ||
| + | |all_trans=NR_002449:-1 Y11159:-1 ENST00000364432.1:4 uc004bra.2:4 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=-1 | ||
|distance_to_tss=2 | |distance_to_tss=2 | ||
| + | |end=127448636 | ||
|entrez_id=26783 | |entrez_id=26783 | ||
|gc_percent=0.497512 | |gc_percent=0.497512 | ||
|gene_alias=RNU65|U65 | |gene_alias=RNU65|U65 | ||
|gene_description="small nucleolar RNA, H/ACA box 65" | |gene_description="small nucleolar RNA, H/ACA box 65" | ||
| − | |gene_name=SNORA65 | + | |gene_id=26783 |
| + | |gene_name="small nucleolar RNA, H/ACA box 65" | ||
| + | |gene_source=HGNC:10222 | ||
| + | |gene_symbol=SNORA65 | ||
| + | |gene_synonyms=U65 | ||
|gene_type=snoRNA | |gene_type=snoRNA | ||
| + | |hgnc_mgi_id=HGNC:10222 | ||
|nearest_ensembl=ENSG00000201302 | |nearest_ensembl=ENSG00000201302 | ||
|nearest_promoter_id=NR_002449 | |nearest_promoter_id=NR_002449 | ||
|nearest_refseq=NR_002449 | |nearest_refseq=NR_002449 | ||
|nearest_unigene=Hs.408054 | |nearest_unigene=Hs.408054 | ||
| + | |num_trans=4 | ||
| + | |species=human | ||
| + | |start=127448633 | ||
| + | |strand=- | ||
| + | |transcript_name=NR_002449 Y11159 | ||
| + | |tss_classification=no | ||
|tss_id=hg_102537.1 | |tss_id=hg_102537.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:30, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NR_002449 Y11159 |
|---|---|
| Distance: | -1 |
| Num_trans: | 4 |
| All_trans: | NR_002449:-1 Y11159:-1 ENST00000364432.1:4 uc004bra.2:4 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NR_002449 |
| Entrez ID: | 26783 |
| Nearest Unigene: | Hs.408054 |
| Nearest Refseq: | NR_002449 |
| Nearest Ensembl: | ENSG00000201302 |
| Gene Name: | "small nucleolar RNA, H/ACA box 65" |
| Gene Alias: | RNU65 |
| Gene Description: | "small nucleolar RNA, H/ACA box 65" |
| Gene Type: | snoRNA |
| CpG%: | 0.005 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
