Difference between revisions of "TSS:Hg 102540.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.105 |distance_to_tss=-2 |entrez_id=6136 |gc_percent=0.616915 |gene_alias=L12 |gene_description=ribosomal protein L12 |gene_name=RPL12 |gene_type=pro...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=NM_000976:0 ENST00000361436.9:25 ENST00000497825.5:25 ENST00000497322.1:25 uc004bqy.3:25 uc064vvj.1:25 uc064vvk.1:25 AK026526:25 AK057602:25 BC105603:25 D28443:25 AF037643:28 BC008230:36 BC050644:45 L06505:45 BC094831:50 ENST00000536368.1:57 uc004bqz.3:57 BC059950:57 KJ901711:112 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| + | |distance=0 | ||
|distance_to_tss=-2 | |distance_to_tss=-2 | ||
| + | |end=127451438 | ||
|entrez_id=6136 | |entrez_id=6136 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
|gene_alias=L12 | |gene_alias=L12 | ||
|gene_description=ribosomal protein L12 | |gene_description=ribosomal protein L12 | ||
| − | |gene_name=RPL12 | + | |gene_id=6136 |
| + | |gene_name=ribosomal protein L12 | ||
| + | |gene_source=HGNC:10302 | ||
| + | |gene_symbol=RPL12 | ||
| + | |gene_synonyms=L12 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:10302 | ||
|nearest_ensembl=ENSG00000197958 | |nearest_ensembl=ENSG00000197958 | ||
|nearest_promoter_id=NM_000976 | |nearest_promoter_id=NM_000976 | ||
|nearest_refseq=NM_000976 | |nearest_refseq=NM_000976 | ||
|nearest_unigene=Hs.408054 | |nearest_unigene=Hs.408054 | ||
| + | |num_trans=20 | ||
| + | |species=human | ||
| + | |start=127451429 | ||
| + | |strand=- | ||
| + | |transcript_name=NM_000976 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102540.1 | |tss_id=hg_102540.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=P30050 | ||
}} | }} | ||
Revision as of 19:30, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_000976 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | NM_000976:0 ENST00000361436.9:25 ENST00000497825.5:25 ENST00000497322.1:25 uc004bqy.3:25 uc064vvj.1:25 uc064vvk.1:25 AK026526:25 AK057602:25 BC105603:25 D28443:25 AF037643:28 BC008230:36 BC050644:45 L06505:45 BC094831:50 ENST00000536368.1:57 uc004bqz.3:57 BC059950:57 KJ901711:112 |
TATA-Box annotation
| Distance to TSS: | -2 |
|---|---|
| Nearest PromoterID: | NM_000976 |
| Entrez ID: | 6136 |
| Nearest Unigene: | Hs.408054 |
| Nearest Refseq: | NM_000976 |
| Nearest Ensembl: | ENSG00000197958 |
| Gene Name: | ribosomal protein L12 |
| Gene Alias: | L12 |
| Gene Description: | ribosomal protein L12 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
