Difference between revisions of "TSS:Hg 10257.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.065 |distance_to_tss=130 |entrez_id=84328 |gc_percent=0.676617 |gene_alias=- |gene_description=leucine zipper and CTNNBIP1 domain containing |gene_n...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AB060688:12 ENST00000377223.5:-25 uc001aqo.4:-25 BC007240:-25 AK304348:-60 AK312550:-65 ENST00000377213.1:-103 uc009vmr.4:-103 NM_001316975:-123 NM_032368:-123 NM_001316973:-123 NM_001316976:-123 NM_001316974:-123 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| + | |distance=12 | ||
|distance_to_tss=130 | |distance_to_tss=130 | ||
| + | |end=9943304 | ||
|entrez_id=84328 | |entrez_id=84328 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=leucine zipper and CTNNBIP1 domain containing | |gene_description=leucine zipper and CTNNBIP1 domain containing | ||
| − | |gene_name=LZIC | + | |gene_id=84328 |
| + | |gene_name=leucine zipper and CTNNBIP1 domain containing | ||
| + | |gene_source=HGNC:17497 | ||
| + | |gene_symbol=LZIC | ||
| + | |gene_synonyms=MGC15436 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:17497 | ||
|nearest_ensembl=ENSG00000162441 | |nearest_ensembl=ENSG00000162441 | ||
|nearest_promoter_id=NM_001316974 | |nearest_promoter_id=NM_001316974 | ||
|nearest_refseq=NM_032368 | |nearest_refseq=NM_032368 | ||
|nearest_unigene=Hs.327252 | |nearest_unigene=Hs.327252 | ||
| + | |num_trans=13 | ||
| + | |species=human | ||
| + | |start=9943290 | ||
| + | |strand=- | ||
| + | |transcript_name=AB060688 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10257.1 | |tss_id=hg_10257.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:32, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AB060688 |
|---|---|
| Distance: | 12 |
| Num_trans: | 13 |
| All_trans: | AB060688:12 ENST00000377223.5:-25 uc001aqo.4:-25 BC007240:-25 AK304348:-60 AK312550:-65 ENST00000377213.1:-103 uc009vmr.4:-103 NM_001316975:-123 NM_032368:-123 NM_001316973:-123 NM_001316976:-123 NM_001316974:-123 |
TATA-Box annotation
| Distance to TSS: | 130 |
|---|---|
| Nearest PromoterID: | NM_001316974 |
| Entrez ID: | 84328 |
| Nearest Unigene: | Hs.327252 |
| Nearest Refseq: | NM_032368 |
| Nearest Ensembl: | ENSG00000162441 |
| Gene Name: | leucine zipper and CTNNBIP1 domain containing |
| Gene Alias: | - |
| Gene Description: | leucine zipper and CTNNBIP1 domain containing |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
