Difference between revisions of "TSS:Hg 102601.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.04 |distance_to_tss=117 |entrez_id=2022 |gc_percent=0.676617 |gene_alias=END|HHT1|ORW1 |gene_description=endoglin |gene_name=ENG |gene_type=protein-...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |HHT1= | ||
| + | |ORW1= | ||
| + | |all_trans=AK290389:0 AK300156:0 ENST00000344849.4:12 uc004bsk.6:12 X72012:12 AK222669:-21 AK302455:-21 ENST00000373203.8:-91 uc004bsj.6:-91 NM_000118:-108 NM_001114753:-108 BC020391:128 BC014271:141 DQ893673:292 DQ895827:292 AB590238:292 BT006872:293 J05481:334 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| + | |distance=0 | ||
|distance_to_tss=117 | |distance_to_tss=117 | ||
| + | |end=127854665 | ||
|entrez_id=2022 | |entrez_id=2022 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
|gene_alias=END|HHT1|ORW1 | |gene_alias=END|HHT1|ORW1 | ||
|gene_description=endoglin | |gene_description=endoglin | ||
| − | |gene_name=ENG | + | |gene_id=2022 |
| + | |gene_name=endoglin | ||
| + | |gene_source=HGNC:3349 | ||
| + | |gene_symbol=ENG | ||
| + | |gene_synonyms=CD105 END HHT1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:3349 | ||
|nearest_ensembl=ENSG00000106991 | |nearest_ensembl=ENSG00000106991 | ||
|nearest_promoter_id=NM_000118 | |nearest_promoter_id=NM_000118 | ||
|nearest_refseq=NM_000118 | |nearest_refseq=NM_000118 | ||
|nearest_unigene=Hs.76753 | |nearest_unigene=Hs.76753 | ||
| + | |num_trans=18 | ||
| + | |species=human | ||
| + | |start=127854647 | ||
| + | |strand=- | ||
| + | |transcript_name=AK290389 AK300156 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102601.1 | |tss_id=hg_102601.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A8K2X4 B4DTC8 | ||
}} | }} | ||
Revision as of 19:33, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK290389 AK300156 |
|---|---|
| Distance: | 0 |
| Num_trans: | 18 |
| All_trans: | AK290389:0 AK300156:0 ENST00000344849.4:12 uc004bsk.6:12 X72012:12 AK222669:-21 AK302455:-21 ENST00000373203.8:-91 uc004bsj.6:-91 NM_000118:-108 NM_001114753:-108 BC020391:128 BC014271:141 DQ893673:292 DQ895827:292 AB590238:292 BT006872:293 J05481:334 |
TATA-Box annotation
| Distance to TSS: | 117 |
|---|---|
| Nearest PromoterID: | NM_000118 |
| Entrez ID: | 2022 |
| Nearest Unigene: | Hs.76753 |
| Nearest Refseq: | NM_000118 |
| Nearest Ensembl: | ENSG00000106991 |
| Gene Name: | endoglin |
| Gene Alias: | END |
| Gene Description: | endoglin |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
