Difference between revisions of "TSS:Hg 102605.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.05 |distance_to_tss=72 |entrez_id=203 |gc_percent=0.666667 |gene_alias=HTL-S-58j |gene_description=adenylate kinase 1 |gene_name=AK1 |gene_type=prot...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000223836.10:-54 uc064vyn.1:-54 NM_001318122:-58 AB021871:400 BT019580:400 CR541977:400 DQ892576:400 KJ896402:400 KJ905138:400 DQ895792:400 AB590127:400 CR542004:400 ENST00000413016.5:409 uc064vyl.1:409 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| + | |distance=-54 | ||
|distance_to_tss=72 | |distance_to_tss=72 | ||
| + | |end=127873490 | ||
|entrez_id=203 | |entrez_id=203 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
|gene_alias=HTL-S-58j | |gene_alias=HTL-S-58j | ||
|gene_description=adenylate kinase 1 | |gene_description=adenylate kinase 1 | ||
| − | |gene_name=AK1 | + | |gene_id=203 |
| + | |gene_name=adenylate kinase 1 | ||
| + | |gene_source=HGNC:361 | ||
| + | |gene_symbol=AK1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:361 | ||
|nearest_ensembl=ENSG00000106992 | |nearest_ensembl=ENSG00000106992 | ||
|nearest_promoter_id=NM_001318122 | |nearest_promoter_id=NM_001318122 | ||
|nearest_refseq=NM_000476 | |nearest_refseq=NM_000476 | ||
|nearest_unigene=Hs.175473 | |nearest_unigene=Hs.175473 | ||
| + | |num_trans=14 | ||
| + | |species=human | ||
| + | |start=127873462 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000223836.10 uc064vyn.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102605.1 | |tss_id=hg_102605.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5T9B7 | ||
}} | }} | ||
Revision as of 19:33, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000223836.10 uc064vyn.1 |
|---|---|
| Distance: | -54 |
| Num_trans: | 14 |
| All_trans: | ENST00000223836.10:-54 uc064vyn.1:-54 NM_001318122:-58 AB021871:400 BT019580:400 CR541977:400 DQ892576:400 KJ896402:400 KJ905138:400 DQ895792:400 AB590127:400 CR542004:400 ENST00000413016.5:409 uc064vyl.1:409 |
TATA-Box annotation
| Distance to TSS: | 72 |
|---|---|
| Nearest PromoterID: | NM_001318122 |
| Entrez ID: | 203 |
| Nearest Unigene: | Hs.175473 |
| Nearest Refseq: | NM_000476 |
| Nearest Ensembl: | ENSG00000106992 |
| Gene Name: | adenylate kinase 1 |
| Gene Alias: | HTL-S-58j |
| Gene Description: | adenylate kinase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
