Difference between revisions of "TSS:Hg 102608.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.12 |distance_to_tss=69 |entrez_id=203 |gc_percent=0.751244 |gene_alias=HTL-S-58j |gene_description=adenylate kinase 1 |gene_name=AK1 |gene_type=prot...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000550992.1:0 uc064vyo.1:0 AK313758:0 BC036803:5 BC001116:5 BC100022:-8 ENST00000373176.5:-61 NM_000476:-61 uc004bsm.4:-61 EU794628:-61 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| + | |distance=0 | ||
|distance_to_tss=69 | |distance_to_tss=69 | ||
| + | |end=127877682 | ||
|entrez_id=203 | |entrez_id=203 | ||
|gc_percent=0.751244 | |gc_percent=0.751244 | ||
|gene_alias=HTL-S-58j | |gene_alias=HTL-S-58j | ||
|gene_description=adenylate kinase 1 | |gene_description=adenylate kinase 1 | ||
| − | |gene_name=AK1 | + | |gene_id=203 |
| + | |gene_name=adenylate kinase 1 | ||
| + | |gene_source=HGNC:361 | ||
| + | |gene_symbol=AK1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:361 | ||
|nearest_ensembl=ENSG00000106992 | |nearest_ensembl=ENSG00000106992 | ||
|nearest_promoter_id=NM_000476 | |nearest_promoter_id=NM_000476 | ||
|nearest_refseq=NM_000476 | |nearest_refseq=NM_000476 | ||
|nearest_unigene=Hs.175473 | |nearest_unigene=Hs.175473 | ||
| + | |num_trans=10 | ||
| + | |species=human | ||
| + | |start=127877665 | ||
| + | |strand=- | ||
|tata_box="-33(CCTTATAAATAG,+,0.00)" | |tata_box="-33(CCTTATAAATAG,+,0.00)" | ||
| + | |transcript_name=ENST00000550992.1 uc064vyo.1 AK313758 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102608.1 | |tss_id=hg_102608.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=F8VRY5 | ||
}} | }} | ||
Revision as of 19:33, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000550992.1 uc064vyo.1 AK313758 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | ENST00000550992.1:0 uc064vyo.1:0 AK313758:0 BC036803:5 BC001116:5 BC100022:-8 ENST00000373176.5:-61 NM_000476:-61 uc004bsm.4:-61 EU794628:-61 |
TATA-Box annotation
| Distance to TSS: | 69 |
|---|---|
| Nearest PromoterID: | NM_000476 |
| Entrez ID: | 203 |
| Nearest Unigene: | Hs.175473 |
| Nearest Refseq: | NM_000476 |
| Nearest Ensembl: | ENSG00000106992 |
| Gene Name: | adenylate kinase 1 |
| Gene Alias: | HTL-S-58j |
| Gene Description: | adenylate kinase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-33(CCTTATAAATAG,+,0.00)" |
