Difference between revisions of "TSS:Hg 102616.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=18 |entrez_id=30815 |gc_percent=0.557214 |gene_alias=SIAT7-F|SIAT7F|ST6GALNACVI |gene_description="ST6 N-acetylgalactosaminide...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |SIAT7F= | ||
| + | |ST6GALNACVI= | ||
| + | |all_trans=ENST00000447681.2:0 ENST00000483353.2:0 uc064vyu.1:0 uc064vyz.1:0 AK124217:0 ENST00000622357.4:-2 NR_104629:-2 NM_001287002:-2 uc004bsr.3:-2 AK310850:-2 AY358672:3 ENST00000494611.1:-62 uc064vyy.1:-62 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=0 | ||
|distance_to_tss=18 | |distance_to_tss=18 | ||
| + | |end=127905346 | ||
|entrez_id=30815 | |entrez_id=30815 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
|gene_alias=SIAT7-F|SIAT7F|ST6GALNACVI | |gene_alias=SIAT7-F|SIAT7F|ST6GALNACVI | ||
|gene_description="ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6" | |gene_description="ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6" | ||
| − | |gene_name=ST6GALNAC6 | + | |gene_id=30815 |
| + | |gene_name="ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6" | ||
| + | |gene_source=HGNC:23364 | ||
| + | |gene_symbol=ST6GALNAC6 | ||
| + | |gene_synonyms=ST6GALNACVI | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23364 | ||
|nearest_ensembl=ENSG00000160408 | |nearest_ensembl=ENSG00000160408 | ||
|nearest_promoter_id=NR_104629 | |nearest_promoter_id=NR_104629 | ||
|nearest_refseq=NM_013443 | |nearest_refseq=NM_013443 | ||
|nearest_unigene=Hs.109672 | |nearest_unigene=Hs.109672 | ||
| + | |num_trans=13 | ||
| + | |species=human | ||
| + | |start=127905313 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000447681.2 ENST00000483353.2 uc064vyu.1 uc064vyz.1 AK124217 | ||
| + | |tss_classification=no | ||
|tss_id=hg_102616.1 | |tss_id=hg_102616.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=X6RH99 | ||
}} | }} | ||
Revision as of 19:34, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000447681.2 ENST00000483353.2 uc064vyu.1 uc064vyz.1 AK124217 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENST00000447681.2:0 ENST00000483353.2:0 uc064vyu.1:0 uc064vyz.1:0 AK124217:0 ENST00000622357.4:-2 NR_104629:-2 NM_001287002:-2 uc004bsr.3:-2 AK310850:-2 AY358672:3 ENST00000494611.1:-62 uc064vyy.1:-62 |
TATA-Box annotation
| Distance to TSS: | 18 |
|---|---|
| Nearest PromoterID: | NR_104629 |
| Entrez ID: | 30815 |
| Nearest Unigene: | Hs.109672 |
| Nearest Refseq: | NM_013443 |
| Nearest Ensembl: | ENSG00000160408 |
| Gene Name: | "ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6" |
| Gene Alias: | SIAT7-F |
| Gene Description: | "ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6" |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
