Difference between revisions of "TSS:Hg 102628.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.075 |distance_to_tss=985 |entrez_id=8818 |gc_percent=0.606965 |gene_alias=CDG1U |gene_description="dolichyl-phosphate mannosyltransferase subunit 2,...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=BC048256:-16 AB451329:-17 AB451473:-17 CR542134:-17 KJ901915:-17 ENST00000473360.1:-272 uc064vzt.1:-272 ENST00000470181.1:-311 uc064vzs.1:-311 ENST00000495270.1:-319 uc064vzr.1:-319 BC015374:-319 ENST00000373110.4:-336 uc064vzu.1:-336 AF061729:-342 BC107863:-347 AB013361:-349 AK312121:-352 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| + | |distance=-16 | ||
|distance_to_tss=985 | |distance_to_tss=985 | ||
| + | |end=127937507 | ||
|entrez_id=8818 | |entrez_id=8818 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
|gene_alias=CDG1U | |gene_alias=CDG1U | ||
|gene_description="dolichyl-phosphate mannosyltransferase subunit 2, regulatory" | |gene_description="dolichyl-phosphate mannosyltransferase subunit 2, regulatory" | ||
| − | |gene_name=DPM2 | + | |gene_id=8818 |
| + | |gene_name="dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit" | ||
| + | |gene_source=HGNC:3006 | ||
| + | |gene_symbol=DPM2 | ||
| + | |gene_synonyms=MGC111193 MGC21559 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:3006 | ||
|nearest_ensembl=ENSG00000136908 | |nearest_ensembl=ENSG00000136908 | ||
|nearest_promoter_id=NM_003863 | |nearest_promoter_id=NM_003863 | ||
|nearest_refseq=NM_003863 | |nearest_refseq=NM_003863 | ||
|nearest_unigene=Hs.108973 | |nearest_unigene=Hs.108973 | ||
| + | |num_trans=18 | ||
| + | |species=human | ||
| + | |start=127937491 | ||
| + | |strand=- | ||
| + | |transcript_name=BC048256 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102628.1 | |tss_id=hg_102628.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:34, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC048256 |
|---|---|
| Distance: | -16 |
| Num_trans: | 18 |
| All_trans: | BC048256:-16 AB451329:-17 AB451473:-17 CR542134:-17 KJ901915:-17 ENST00000473360.1:-272 uc064vzt.1:-272 ENST00000470181.1:-311 uc064vzs.1:-311 ENST00000495270.1:-319 uc064vzr.1:-319 BC015374:-319 ENST00000373110.4:-336 uc064vzu.1:-336 AF061729:-342 BC107863:-347 AB013361:-349 AK312121:-352 |
TATA-Box annotation
| Distance to TSS: | 985 |
|---|---|
| Nearest PromoterID: | NM_003863 |
| Entrez ID: | 8818 |
| Nearest Unigene: | Hs.108973 |
| Nearest Refseq: | NM_003863 |
| Nearest Ensembl: | ENSG00000136908 |
| Gene Name: | "dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit" |
| Gene Alias: | CDG1U |
| Gene Description: | "dolichyl-phosphate mannosyltransferase subunit 2, regulatory" |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
