Difference between revisions of "TSS:Hg 102629.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.09 |distance_to_tss=643 |entrez_id=8818 |gc_percent=0.696517 |gene_alias=CDG1U |gene_description="dolichyl-phosphate mannosyltransferase subunit 2,...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000495270.1:0 ENST00000470181.1:0 ENST00000373110.4:0 uc064vzr.1:0 uc064vzs.1:0 uc064vzu.1:0 BC015374:0 BC107863:0 AF061729:0 AB013361:0 AK312121:0 ENST00000473360.1:23 uc064vzt.1:23 AB451329:278 AB451473:278 CR542134:278 KJ901915:278 BC048256:279 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| + | |distance=0 | ||
|distance_to_tss=643 | |distance_to_tss=643 | ||
| + | |end=127937881 | ||
|entrez_id=8818 | |entrez_id=8818 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
|gene_alias=CDG1U | |gene_alias=CDG1U | ||
|gene_description="dolichyl-phosphate mannosyltransferase subunit 2, regulatory" | |gene_description="dolichyl-phosphate mannosyltransferase subunit 2, regulatory" | ||
| − | |gene_name=DPM2 | + | |gene_id=8818 |
| + | |gene_name="dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit" | ||
| + | |gene_source=HGNC:3006 | ||
| + | |gene_symbol=DPM2 | ||
| + | |gene_synonyms=MGC111193 MGC21559 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:3006 | ||
|nearest_ensembl=ENSG00000136908 | |nearest_ensembl=ENSG00000136908 | ||
|nearest_promoter_id=NM_003863 | |nearest_promoter_id=NM_003863 | ||
|nearest_refseq=NM_003863 | |nearest_refseq=NM_003863 | ||
|nearest_unigene=Hs.108973 | |nearest_unigene=Hs.108973 | ||
| + | |num_trans=18 | ||
| + | |species=human | ||
| + | |start=127937801 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000495270.1 ENST00000470181.1 ENST00000373110.4 uc064vzr.1 uc064vzs.1 uc064vzu.1 BC015374 BC107863 AF061729 AB013361 AK312121 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102629.1 | |tss_id=hg_102629.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5T9C7 | ||
}} | }} | ||
Revision as of 19:34, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000495270.1 ENST00000470181.1 ENST00000373110.4 uc064vzr.1 uc064vzs.1 uc064vzu.1 BC015374 BC107863 AF061729 AB013361 AK312121 |
|---|---|
| Distance: | 0 |
| Num_trans: | 18 |
| All_trans: | ENST00000495270.1:0 ENST00000470181.1:0 ENST00000373110.4:0 uc064vzr.1:0 uc064vzs.1:0 uc064vzu.1:0 BC015374:0 BC107863:0 AF061729:0 AB013361:0 AK312121:0 ENST00000473360.1:23 uc064vzt.1:23 AB451329:278 AB451473:278 CR542134:278 KJ901915:278 BC048256:279 |
TATA-Box annotation
| Distance to TSS: | 643 |
|---|---|
| Nearest PromoterID: | NM_003863 |
| Entrez ID: | 8818 |
| Nearest Unigene: | Hs.108973 |
| Nearest Refseq: | NM_003863 |
| Nearest Ensembl: | ENSG00000136908 |
| Gene Name: | "dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit" |
| Gene Alias: | CDG1U |
| Gene Description: | "dolichyl-phosphate mannosyltransferase subunit 2, regulatory" |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
