Difference between revisions of "TSS:Hg 102638.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.045 |distance_to_tss=-30 |entrez_id=399665 |gc_percent=0.616915 |gene_alias=C9orf132|EEIG1|SYM-3A|bA203J24.7 |gene_description=family with sequence...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |EEIG1= | ||
| + | |SYM-3A= | ||
| + | |all_trans=ENST00000373084.8:12 ENST00000300434.3:12 uc004bsw.2:12 uc064wae.1:12 BC142952:15 NM_203305:20 BC047949:20 BC137087:146 BC137088:146 | ||
| + | |bA203J24.7= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| + | |distance=12 | ||
|distance_to_tss=-30 | |distance_to_tss=-30 | ||
| + | |end=127950755 | ||
|entrez_id=399665 | |entrez_id=399665 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
|gene_alias=C9orf132|EEIG1|SYM-3A|bA203J24.7 | |gene_alias=C9orf132|EEIG1|SYM-3A|bA203J24.7 | ||
|gene_description=family with sequence similarity 102 member A | |gene_description=family with sequence similarity 102 member A | ||
| − | |gene_name=FAM102A | + | |gene_id=399665 |
| + | |gene_name=family with sequence similarity 102 member A | ||
| + | |gene_source=HGNC:31419 | ||
| + | |gene_symbol=FAM102A | ||
| + | |gene_synonyms=Eeig1 SYM-3A bA203J24.7 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:31419 | ||
|nearest_ensembl=ENSG00000167106 | |nearest_ensembl=ENSG00000167106 | ||
|nearest_promoter_id=NM_203305 | |nearest_promoter_id=NM_203305 | ||
|nearest_refseq=NM_203305 | |nearest_refseq=NM_203305 | ||
|nearest_unigene=Hs.535972 | |nearest_unigene=Hs.535972 | ||
| + | |num_trans=9 | ||
| + | |species=human | ||
| + | |start=127950733 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000373084.8 ENST00000300434.3 uc004bsw.2 uc064wae.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102638.1 | |tss_id=hg_102638.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5T9C2 | ||
}} | }} | ||
Revision as of 19:35, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000373084.8 ENST00000300434.3 uc004bsw.2 uc064wae.1 |
|---|---|
| Distance: | 12 |
| Num_trans: | 9 |
| All_trans: | ENST00000373084.8:12 ENST00000300434.3:12 uc004bsw.2:12 uc064wae.1:12 BC142952:15 NM_203305:20 BC047949:20 BC137087:146 BC137088:146 |
TATA-Box annotation
| Distance to TSS: | -30 |
|---|---|
| Nearest PromoterID: | NM_203305 |
| Entrez ID: | 399665 |
| Nearest Unigene: | Hs.535972 |
| Nearest Refseq: | NM_203305 |
| Nearest Ensembl: | ENSG00000167106 |
| Gene Name: | family with sequence similarity 102 member A |
| Gene Alias: | C9orf132 |
| Gene Description: | family with sequence similarity 102 member A |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
