Difference between revisions of "TSS:Hg 102643.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.155 |distance_to_tss=-429 |entrez_id=399665 |gc_percent=0.81592 |gene_alias=C9orf132|EEIG1|SYM-3A|bA203J24.7 |gene_description=family with sequence...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |EEIG1= | ||
| + | |SYM-3A= | ||
| + | |all_trans=NM_001035254:424 AK058004:424 ENST00000373095.5:444 uc004bsx.3:444 ENST00000494606.1:496 uc064wah.1:496 | ||
| + | |bA203J24.7= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| + | |distance=424 | ||
|distance_to_tss=-429 | |distance_to_tss=-429 | ||
| + | |end=127980968 | ||
|entrez_id=399665 | |entrez_id=399665 | ||
|gc_percent=0.81592 | |gc_percent=0.81592 | ||
|gene_alias=C9orf132|EEIG1|SYM-3A|bA203J24.7 | |gene_alias=C9orf132|EEIG1|SYM-3A|bA203J24.7 | ||
|gene_description=family with sequence similarity 102 member A | |gene_description=family with sequence similarity 102 member A | ||
| − | |gene_name=FAM102A | + | |gene_id=399665 |
| + | |gene_name=family with sequence similarity 102 member A | ||
| + | |gene_source=HGNC:31419 | ||
| + | |gene_symbol=FAM102A | ||
| + | |gene_synonyms=Eeig1 SYM-3A bA203J24.7 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:31419 | ||
|nearest_ensembl=ENSG00000167106 | |nearest_ensembl=ENSG00000167106 | ||
|nearest_promoter_id=NM_001035254 | |nearest_promoter_id=NM_001035254 | ||
|nearest_refseq=NM_203305 | |nearest_refseq=NM_203305 | ||
|nearest_unigene=Hs.535972 | |nearest_unigene=Hs.535972 | ||
| + | |num_trans=6 | ||
| + | |species=human | ||
| + | |start=127980956 | ||
| + | |strand=- | ||
| + | |transcript_name=NM_001035254 AK058004 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102643.1 | |tss_id=hg_102643.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5T9C2 | ||
}} | }} | ||
Revision as of 19:35, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001035254 AK058004 |
|---|---|
| Distance: | 424 |
| Num_trans: | 6 |
| All_trans: | NM_001035254:424 AK058004:424 ENST00000373095.5:444 uc004bsx.3:444 ENST00000494606.1:496 uc064wah.1:496 |
TATA-Box annotation
| Distance to TSS: | -429 |
|---|---|
| Nearest PromoterID: | NM_001035254 |
| Entrez ID: | 399665 |
| Nearest Unigene: | Hs.535972 |
| Nearest Refseq: | NM_203305 |
| Nearest Ensembl: | ENSG00000167106 |
| Gene Name: | family with sequence similarity 102 member A |
| Gene Alias: | C9orf132 |
| Gene Description: | family with sequence similarity 102 member A |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
